متابعة
Pablo D. Dans
Pablo D. Dans
Department of Biological Sciences (CENUR Litoral Norte - UdelaR) & Institut Pasteur de Montevideo
بريد إلكتروني تم التحقق منه على pasteur.edu.uy - الصفحة الرئيسية
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
Parmbsc1: a refined force field for DNA simulations‏
I Ivani, PD Dans, A Noy, A Pérez, I Faustino, J Walther, P Andrio, R Goñi, ...‏
Nature methods 13 (1), 55, 2016‏
1017*2016
μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA‏
M Pasi, JH Maddocks, D Beveridge, TC Bishop, DA Case, T Cheatham III, ...‏
Nucleic acids research 42 (19), 12272-12283, 2014‏
2282014
Direct measurement of the dielectric polarization properties of DNA‏
A Cuervo, PD Dans, JL Carrascosa, M Orozco, G Gomila, L Fumagalli‏
Proceedings of the National Academy of Sciences 111 (35), E3624-E3630, 2014‏
2142014
Multiscale simulation of DNA‏
PD Dans, J Walther, H Gómez, M Orozco‏
Current opinion in structural biology 37, 29-45, 2016‏
1782016
A coarse grained model for atomic-detailed DNA simulations with explicit electrostatics‏
PD Dans, A Zeida, MR Machado, S Pantano‏
Journal of chemical theory and computation 6 (5), 1711-1725, 2010‏
1662010
The structural impact of DNA mismatches‏
G Rossetti, PD Dans, I Gomez-Pinto, I Ivani, C Gonzalez, M Orozco‏
Nucleic acids research 43 (8), 4309-4321, 2015‏
1622015
Another coarse grain model for aqueous solvation: WAT FOUR?‏
L Darré, MR Machado, PD Dans, FE Herrera, S Pantano‏
Journal of Chemical Theory and Computation 6 (12), 3793-3807, 2010‏
1612010
Connecting proline and γ-aminobutyric acid in stressed plants through non-enzymatic reactions‏
S Signorelli, PD Dans, EL Coitiño, O Borsani, J Monza‏
PLoS One 10 (3), e0115349, 2015‏
1602015
Epigenetic loss of RNA-methyltransferase NSUN5 in glioma targets ribosomes to drive a stress adaptive translational program‏
M Janin, V Ortiz-Barahona, MC de Moura, A Martínez-Cardús, ...‏
Acta Neuropathologica, 1-22, 2019‏
1542019
How accurate are accurate force-fields for B-DNA?‏
PD Dans, I Ivani, A Hospital, G Portella, C González, M Orozco‏
Nucleic Acids Research 45 (7), 4217-4230, 2017‏
146*2017
Long-timescale dynamics of the Drew–Dickerson dodecamer‏
PD Dans, L Danilāne, I Ivani, T Dršata, F Lankaš, A Hospital, J Walther, ...‏
Nucleic Acids Research 44 (9), 4052-4066, 2016‏
130*2016
Glyceraldehyde-3-phosphate dehydrogenase is a chaperone that allocates labile heme in cells‏
EA Sweeny, AB Singh, R Chakravarti, O Martinez-Guzman, A Saini, ...‏
Journal of Biological Chemistry 293 (37), 14557-14568, 2018‏
1142018
Impact of DNA methylation on 3D genome structure‏
D Buitrago, M Labrador, JP Arcon, R Lema, O Flores, A Esteve-Codina, ...‏
Nature Communication 12, 3243, 2021‏
1012021
Exploring polymorphisms in B-DNA helical conformations‏
PD Dans, A Perez, I Faustino, R Lavery, M Orozco‏
Nucleic acids research 40 (21), 10668-10678, 2012‏
962012
Unraveling the sequence-dependent polymorphic behavior of d (CpG) steps in B-DNA‏
PD Dans, I Faustino, F Battistini, K Zakrzewska, R Lavery, M Orozco‏
Nucleic acids research 42 (18), 11304-11320, 2014‏
902014
Switching reversibility to irreversibility in glycogen synthase kinase 3 inhibitors: clues for specific design of new compounds‏
DI Perez, V Palomo, C Pérez, C Gil, PD Dans, FJ Luque, S Conde, ...‏
Journal of Medicinal Chemistry 54 (12), 4042-4056, 2011‏
892011
Saturation of recognition elements blocks evolution of new tRNA identities‏
A Saint-Léger, C Bello, PD Dans, AG Torres, EM Novoa, N Camacho, ...‏
Science advances 2 (4), e1501860, 2016‏
592016
A hybrid all-atom/coarse grain model for multiscale simulations of DNA‏
MR Machado, PD Dans, S Pantano‏
Physical Chemistry Chemical Physics 13 (40), 18134-18144, 2011‏
562011
BIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation data‏
A Hospital, P Andrio, C Cugnasco, L Codo, Y Becerra, PD Dans, ...‏
Nucleic acids research 44 (D1), D272-D278, 2016‏
552016
Breathing, bubbling, and bending: DNA flexibility from multimicrosecond simulations‏
A Zeida, MR Machado, PD Dans, S Pantano‏
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 86 (2 …, 2012‏
502012
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مقالات 1–20