Recent Advances and Emerging Applications in Text and Data Mining for Biomedical Discovery GH Gonzalez, T Tahsin, BC Goodale, AC Greene, CS Greene Briefings in Bioinformatics, 2015 | 198 | 2015 |
Knowledge-driven geospatial location resolution for phylogeographic models of virus migration D Weissenbacher, T Tahsin, R Beard, M Figaro, R Rivera, M Scotch, ... Bioinformatics 31 (12), i348-i356, 2015 | 36 | 2015 |
A high-precision rule-based extraction system for expanding geospatial metadata in GenBank records T Tahsin, D Weissenbacher, R Rivera, R Beard, M Firago, G Wallstrom, ... Journal of the American Medical Informatics Association 23 (5), 934-941, 2016 | 24 | 2016 |
Incorporating sampling uncertainty in the geospatial assignment of taxa for virus phylogeography M Scotch, T Tahsin, D Weissenbacher, K O’Connor, A Magge, M Vaiente, ... Virus Evolution 5 (1), vey043, 2019 | 18 | 2019 |
GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records T Tahsin, D Weissenbacher, K O’Connor, A Magge, M Scotch, ... Bioinformatics 34 (9), 1606-1608, 2018 | 15 | 2018 |
Natural language processing methods for enhancing geographic metadata for phylogeography of zoonotic viruses T Tahsin, R Beard, R Rivera, R Lauder, G Wallstrom, M Scotch, ... AMIA Summits on Translational Science Proceedings 2014, 102, 2014 | 15 | 2014 |
Extracting geographic locations from the literature for virus phylogeography using supervised and distant supervision methods D Weissenbacher, A Sarker, T Tahsin, M Scotch, G Gonzalez AMIA Summits on Translational Science Proceedings 2017, 114, 2017 | 12 | 2017 |
Named entity linking of geospatial and host metadata in GenBank for advancing biomedical research T Tahsin, D Weissenbacher, D Jones-Shargani, D Magee, M Vaiente, ... Database 2017, bax093, 2017 | 10 | 2017 |
GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography A Magge, D Weissenbacher, K O’Connor, T Tahsin, ... Bioinformatics 36 (20), 5120-5121, 2020 | 8 | 2020 |
Automatic identification and quantification of extra-well fluorescence in microarray images R Rivera, J Wang, X Yu, G Demirkan, M Hopper, X Bian, T Tahsin, ... Journal of Proteome Research 16 (11), 3969-3977, 2017 | 4 | 2017 |
Automated Extraction and Classification of Drug-Drug Interactions from Text T Tahsin, E Emadzadeh, G Gonzalez KDD Workshop on Data Mining for Healthcare (DMH), 2013 | 2 | 2013 |
Knowledge-Driven Methods for Geographic Information Extraction in the Biomedical Domain T Tahsin Arizona State University, 2019 | | 2019 |