| Eutrophication: causes, consequences, and controls in aquatic ecosystems MF Chislock, E Doster, RA Zitomer, AE Wilson Nature Education Knowledge 4 (4), 10, 2013 | 1013 | 2013 |
| MEGARes: an antimicrobial resistance database for high throughput sequencing SM Lakin, C Dean, NR Noyes, A Dettenwanger, AS Ross, E Doster, ... Nucleic acids research 45 (D1), D574-D580, 2017 | 367 | 2017 |
| MEGARes 2.0: a database for classification of antimicrobial drug, biocide and metal resistance determinants in metagenomic sequence data E Doster, SM Lakin, CJ Dean, C Wolfe, JG Young, C Boucher, KE Belk, ... Nucleic acids research 48 (D1), D561-D569, 2020 | 364 | 2020 |
| Use of metagenomic shotgun sequencing technology to detect foodborne pathogens within the microbiome of the beef production chain X Yang, NR Noyes, E Doster, JN Martin, LM Linke, RJ Magnuson, H Yang, ... Applied and environmental microbiology 82 (8), 2433-2443, 2016 | 158 | 2016 |
| Characterization of the microbial resistome in conventional and “raised without antibiotics” beef and dairy production systems P Rovira, T McAllister, SM Lakin, SR Cook, E Doster, NR Noyes, ... Frontiers in microbiology 10, 1980, 2019 | 83 | 2019 |
| Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing NR Noyes, ME Weinroth, JK Parker, CJ Dean, SM Lakin, RA Raymond, ... Microbiome 5, 1-13, 2017 | 78 | 2017 |
| MEGARes and AMR++, v3. 0: an updated comprehensive database of antimicrobial resistance determinants and an improved software pipeline for classification using high-throughput … N Bonin, E Doster, H Worley, LJ Pinnell, JE Bravo, P Ferm, S Marini, ... Nucleic acids research 51 (D1), D744-D752, 2023 | 76 | 2023 |
| Investigating effects of tulathromycin metaphylaxis on the fecal resistome and microbiome of commercial feedlot cattle early in the feeding period E Doster, P Rovira, NR Noyes, BA Burgess, X Yang, MD Weinroth, ... Frontiers in microbiology 9, 1715, 2018 | 65 | 2018 |
| Large effects of consumer offense on ecosystem structure and function MF Chislock, O Sarnelle, BK Olsen, E Doster, AE Wilson Ecology 94 (11), 2375-2380, 2013 | 61 | 2013 |
| Effects of a Saccharomyces cerevisiae fermentation product on liver abscesses, fecal microbiome, and resistome in feedlot cattle raised without antibiotics KL Huebner, JN Martin, CJ Weissend, KL Holzer, JK Parker, SM Lakin, ... Scientific reports 9 (1), 2559, 2019 | 59 | 2019 |
| Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes MD Weinroth, JN Martin, E Doster, I Geornaras, JK Parker, CR Carlson, ... Journal of animal science 97 (11), 4567-4578, 2019 | 43 | 2019 |
| Effects of ceftiofur and chlortetracycline on the resistomes of feedlot cattle MD Weinroth, HM Scott, B Norby, GH Loneragan, NR Noyes, P Rovira, ... Applied and environmental microbiology 84 (13), e00610-18, 2018 | 38 | 2018 |
| Metagenomic characterization of the microbiome and resistome of retail ground beef products E Doster, KM Thomas, MD Weinroth, JK Parker, KK Crone, TM Arthur, ... Frontiers in Microbiology 11, 541972, 2020 | 28 | 2020 |
| Genomic diversity of class I integrons from antimicrobial resistant strains of Salmonella Typhimurium isolated from livestock, poultry and humans S Rao, L Linke, E Doster, D Hyatt, BA Burgess, R Magnuson, ... Plos one 15 (12), e0243477, 2020 | 24 | 2020 |
| Antimicrobial resistance in US retail ground beef with and without label claims regarding antibiotic use JW Schmidt, A Vikram, E Doster, K Thomas, MD Weinroth, J Parker, ... Journal of Food Protection 84 (5), 827-842, 2021 | 23 | 2021 |
| A cautionary report for pathogen identification using shotgun metagenomics; a comparison to aerobic culture and polymerase chain reaction for Salmonella enterica identification E Doster, P Rovira, NR Noyes, BA Burgess, X Yang, MD Weinroth, ... Frontiers in Microbiology 10, 2499, 2019 | 23 | 2019 |
| Characterization and comparison of the microbiomes and resistomes of colostrum from selectively treated dry cows A Vasquez, D Nydam, C Foditsch, L Warnick, C Wolfe, E Doster, ... Journal of Dairy Science 105 (1), 637-653, 2022 | 18 | 2022 |
| The biogeography of gastrointestinal mucosal microbiota of beef cattle at harvest JD Young, LJ Pinnell, CA Wolfe, E Doster, R Valeris-Chacin, ... Frontiers in Microbiology 15, 1490882, 2024 | 15 | 2024 |
| Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing. Microbiome 5: 142 NR Noyes, ME Weinroth, JK Parker, CJ Dean, SM Lakin, RA Raymond, ... | 13 | 2017 |
| Recognition of an important water quality issue at zoos: prevalence and potential threat of toxic cyanobacteria E Doster, MF Chislock, JF Roberts, JJ Kottwitz, AE Wilson Journal of Zoo and Wildlife Medicine, 165-168, 2014 | 13 | 2014 |
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