Genomics of divergence along a continuum of parapatric population differentiation PGD Feulner, FJJ Chain, M Panchal, Y Huang, C Eizaguirre, M Kalbe, ... PLoS genetics 11 (2), e1004966, 2015 | 163 | 2015 |
Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods JM Flynn, EA Brown, FJJ Chain, HJ MacIsaac, ME Cristescu Ecology and evolution 5 (11), 2252-2266, 2015 | 157 | 2015 |
Metabarcoding using multiplexed markers increases species detection in complex zooplankton communities GK Zhang, FJJ Chain, CL Abbott, ME Cristescu Evolutionary applications 11 (10), 1901-1914, 2018 | 154 | 2018 |
Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities? EA Brown, FJJ Chain, TJ Crease, HJ MacIsaac, ME Cristescu Ecology and evolution 5 (11), 2234-2251, 2015 | 147 | 2015 |
Early detection of aquatic invaders using metabarcoding reveals a high number of non‐indigenous species in C anadian ports EA Brown, FJJ Chain, A Zhan, HJ MacIsaac, ME Cristescu Diversity and Distributions 22 (10), 1045-1059, 2016 | 131 | 2016 |
Metabarcoding reveals strong spatial structure and temporal turnover of zooplankton communities among marine and freshwater ports FJJ Chain, EA Brown, HJ MacIsaac, ME Cristescu Diversity and Distributions 22 (5), 493-504, 2016 | 131 | 2016 |
Genome‐wide patterns of standing genetic variation in a marine population of three‐spined sticklebacks PGD Feulner, FJJ Chain, M Panchal, C Eizaguirre, M Kalbe, TL Lenz, ... Molecular ecology 22 (3), 635-649, 2013 | 109 | 2013 |
The effects of parameter choice on defining molecular operational taxonomic units and resulting ecological analyses of metabarcoding data EL Clare, FJJ Chain, JE Littlefair, ME Cristescu Genome 59 (11), 981-990, 2016 | 105 | 2016 |
Living on the edge: how philopatry maintains adaptive potential VA Stiebens, SE Merino, C Roder, FJJ Chain, PLM Lee, C Eizaguirre Proceedings of the Royal Society B: Biological Sciences 280 (1763), 20130305, 2013 | 105 | 2013 |
Multiple mechanisms promote the retained expression of gene duplicates in the tetraploid frog Xenopus laevis FJJ Chain, BJ Evans PLoS genetics 2 (4), e56, 2006 | 95 | 2006 |
Extensive copy-number variation of young genes across stickleback populations FJJ Chain, PGD Feulner, M Panchal, C Eizaguirre, IE Samonte, M Kalbe, ... PLoS genetics 10 (12), e1004830, 2014 | 88 | 2014 |
Spontaneous Mutation Accumulation in Daphnia pulex in Selection-Free vs. Competitive Environments JM Flynn, FJJ Chain, DJ Schoen, ME Cristescu Molecular Biology and Evolution 34 (1), 160-173, 2017 | 75 | 2017 |
No consistent effects of humans on animal genetic diversity worldwide KL Millette, V Fugere, C Debyser, A Greiner, FJJ Chain, A Gonzalez Ecology letters 23 (1), 55-67, 2020 | 69 | 2020 |
The pipid root AJ Bewick, FJJ Chain, J Heled, BJ Evans Systematic Biology 61 (6), 913-926, 2012 | 61 | 2012 |
Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization FJJ Chain, D Ilieva, BJ Evans BMC evolutionary biology 8, 1-16, 2008 | 59 | 2008 |
Transcriptome profiling of immune tissues reveals habitat‐specific gene expression between lake and river sticklebacks Y Huang, FJJ Chain, M Panchal, C Eizaguirre, M Kalbe, TL Lenz, ... Molecular ecology 25 (4), 943-958, 2016 | 58 | 2016 |
Reproducibility of pyrosequencing data for biodiversity assessment in complex communities A Zhan, S He, EA Brown, FJJ Chain, TW Therriault, CL Abbott, DD Heath, ... Methods in Ecology and Evolution 5 (9), 881-890, 2014 | 50 | 2014 |
Genomic divergence between nine-and three-spined sticklebacks B Guo, FJJ Chain, E Bornberg-Bauer, EH Leder, J Merilä Bmc Genomics 14, 1-11, 2013 | 50 | 2013 |
The odds of duplicate gene persistence after polyploidization FJJ Chain, J Dushoff, BJ Evans BMC genomics 12, 1-7, 2011 | 45 | 2011 |
Evolution of MHC class I genes in the endangered loggerhead sea turtle (Caretta caretta) revealed by 454 amplicon sequencing VA Stiebens, SE Merino, FJJ Chain, C Eizaguirre BMC evolutionary biology 13, 1-11, 2013 | 43 | 2013 |