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Single-cell sequencing of peripheral mononuclear cells reveals distinct immune response landscapes of COVID-19 and influenza patients L Zhu, P Yang, Y Zhao, Z Zhuang, Z Wang, R Song, J Zhang, C Liu, ... Immunity 53 (3), 685-696. e3, 2020 | 349 | 2020 |
MicroRNA cluster 302–367 enhances somatic cell reprogramming by accelerating a mesenchymal-to-epithelial transition B Liao, X Bao, L Liu, S Feng, A Zovoilis, W Liu, Y Xue, J Cai, X Guo, B Qin, ... Journal of Biological Chemistry 286 (19), 17359-17364, 2011 | 341 | 2011 |
Spatially informed clustering, integration, and deconvolution of spatial transcriptomics with GraphST Y Long, KS Ang, M Li, KLK Chong, R Sethi, C Zhong, H Xu, Z Ong, ... Nature Communications 14 (1), 1155, 2023 | 231 | 2023 |
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity L Liu, C Liu, A Quintero, L Wu, Y Yuan, M Wang, M Cheng, L Leng, L Xu, ... Nature communications 10 (1), 470, 2019 | 230 | 2019 |
Unsupervised spatially embedded deep representation of spatial transcriptomics H Xu, H Fu, Y Long, KS Ang, R Sethi, K Chong, M Li, R Uddamvathanak, ... Genome Medicine 16 (1), 12, 2024 | 187 | 2024 |
Dissecting primate early post-implantation development using long-term in vitro embryo culture Y Niu, N Sun, C Li, Y Lei, Z Huang, J Wu, C Si, X Dai, C Liu, J Wei, L Liu, ... Science 366 (6467), eaaw5754, 2019 | 184 | 2019 |
Single-cell Stereo-seq reveals induced progenitor cells involved in axolotl brain regeneration X Wei, S Fu, H Li, Y Liu, S Wang, W Feng, Y Yang, X Liu, YY Zeng, ... Science 377 (6610), eabp9444, 2022 | 170 | 2022 |
The single-cell stereo-seq reveals region-specific cell subtypes and transcriptome profiling in Arabidopsis leaves K Xia, HX Sun, J Li, J Li, Y Zhao, L Chen, C Qin, R Chen, Z Chen, G Liu, ... Developmental Cell 57 (10), 1299-1310. e4, 2022 | 168 | 2022 |
Rolling back human pluripotent stem cells to an eight-cell embryo-like stage MA Mazid, C Ward, Z Luo, C Liu, Y Li, Y Lai, L Wu, J Li, W Jia, Y Jiang, ... Nature 605 (7909), 315-324, 2022 | 156 | 2022 |
Cell transcriptomic atlas of the non-human primate Macaca fascicularis L Han, X Wei, C Liu, G Volpe, Z Zhuang, X Zou, Z Wang, T Pan, Y Yuan, ... Nature 604 (7907), 723-731, 2022 | 139 | 2022 |
An integrated chromatin accessibility and transcriptome landscape of human pre-implantation embryos L Liu, L Leng, C Liu, C Lu, Y Yuan, L Wu, F Gong, S Zhang, X Wei, ... Nature communications 10 (1), 364, 2019 | 120 | 2019 |
An ATAC-seq atlas of chromatin accessibility in mouse tissues C Liu, M Wang, X Wei, L Wu, J Xu, X Dai, J Xia, M Cheng, Y Yuan, ... Scientific data 6 (1), 65, 2019 | 115 | 2019 |
High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae M Wang, Q Hu, T Lv, Y Wang, Q Lan, R Xiang, Z Tu, Y Wei, K Han, C Shi, ... Developmental Cell 57 (10), 1271-1283. e4, 2022 | 113 | 2022 |
Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis C Liu, R Li, Y Li, X Lin, K Zhao, Q Liu, S Wang, X Yang, X Shi, Y Ma, C Pei, ... Developmental Cell 57 (10), 1284-1298. e5, 2022 | 110 | 2022 |
Single-cell spatial transcriptome reveals cell-type organization in the macaque cortex A Chen, Y Sun, Y Lei, C Li, S Liao, J Meng, Y Bai, Z Liu, Z Liang, Z Zhu, ... Cell 186 (17), 3726-3743. e24, 2023 | 103 | 2023 |
Autophagy and mTORC1 regulate the stochastic phase of somatic cell reprogramming Y Wu, Y Li, H Zhang, Y Huang, P Zhao, Y Tang, X Qiu, Y Ying, W Li, S Ni, ... Nature cell biology 17 (6), 715-725, 2015 | 94 | 2015 |
An invasive zone in human liver cancer identified by Stereo-seq promotes hepatocyte–tumor cell crosstalk, local immunosuppression and tumor progression L Wu, J Yan, Y Bai, F Chen, X Zou, J Xu, A Huang, L Hou, Y Zhong, Z Jing, ... Cell research 33 (8), 585-603, 2023 | 90 | 2023 |
Transcriptional pause release is a rate-limiting step for somatic cell reprogramming L Liu, Y Xu, M He, M Zhang, F Cui, L Lu, M Yao, W Tian, C Benda, ... Cell Stem Cell 15 (5), 574-588, 2014 | 90 | 2014 |
Identification of HSC/MPP expansion units in fetal liver by single-cell spatiotemporal transcriptomics S Gao, Q Shi, Y Zhang, G Liang, Z Kang, B Huang, D Ma, L Wang, J Jiao, ... Cell research 32 (1), 38-53, 2022 | 80 | 2022 |