| Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU identity threshold M Chiarello, M McCauley, S Villéger, CR Jackson PloS one 17 (2), e0264443, 2022 | 168 | 2022 |
| Transcriptomic analysis of differential host gene expression upon uptake of symbionts: a case study with Symbiodinium and the major bioeroding sponge Cliona varians A Riesgo, K Peterson, C Richardson, T Heist, B Strehlow, M McCauley, ... BMC genomics 15, 1-22, 2014 | 55 | 2014 |
| Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology E Gould, HS Fraser, TH Parker, S Nakagawa, SC Griffith, PA Vesk, ... BMC biology 23 (1), 35, 2025 | 43 | 2025 |
| Microbiomes of Caribbean octocorals vary over time but are resistant to environmental change M McCauley, CR Jackson, TL Goulet Frontiers in microbiology 11, 1272, 2020 | 40* | 2020 |
| Inadvertent human genomic bycatch and intentional capture raise beneficial applications and ethical concerns with environmental DNA L Whitmore, M McCauley, JA Farrell, MR Stammnitz, SA Koda, ... Nature ecology & evolution 7 (6), 873-888, 2023 | 38 | 2023 |
| Gut microbiomes of freshwater mussels (Unionidae) are taxonomically and phylogenetically variable across years but remain functionally stable M McCauley, M Chiarello, CL Atkinson, CR Jackson Microorganisms 9 (2), 411, 2021 | 25 | 2021 |
| Species traits dictate seasonal-dependent responses of octocoral–algal symbioses to elevated temperature and ultraviolet radiation M McCauley, AT Banaszak, TL Goulet Coral Reefs 37, 901-917, 2018 | 21 | 2018 |
| Caribbean gorgonian octocorals cope with nutrient enrichment M McCauley, TL Goulet Marine Pollution Bulletin 141, 621-628, 2019 | 20 | 2019 |
| Environment and Co-occurring Native Mussel Species, but Not Host Genetics, Impact the Microbiome of a Freshwater Invasive Species (Corbicula fluminea) M Chiarello, JR Bucholz, M McCauley, SN Vaughn, GW Hopper, ... Frontiers in Microbiology 13, 800061, 2022 | 19 | 2022 |
| Gut microbiomes of sympatric Amazonian wood‐eating catfishes (Loricariidae) reflect host identity and little role in wood digestion M McCauley, DP German, NK Lujan, CR Jackson Ecology and Evolution 10 (14), 7117-7128, 2020 | 19 | 2020 |
| Systematic review of cnidarian microbiomes reveals insights into the structure, specificity, and fidelity of marine associations M McCauley, TL Goulet, CR Jackson, S Loesgen Nature Communications 14 (1), 4899, 2023 | 18* | 2023 |
| The potential of azooxanthellate poriferan hosts to assess the fundamental and realized Symbiodinium niche: evaluating a novel method to initiate Symbiodinium associations B Strehlow, S Friday, M McCauley, M Hill Coral Reefs 35, 1201-1212, 2016 | 10 | 2016 |
| A novel eDNA approach for rare species monitoring: Application of long-read shotgun sequencing to Lynx rufus soil pawprints SA Koda, M McCauley, JA Farrell, IJ Duffy, FG Duffy, S Loesgen, J Whilde, ... Biological Conservation 287, 110315, 2023 | 6 | 2023 |
| Heat stress of algal partner hinders colonization success and alters the algal cell surface glycome in a cnidarian-algal symbiosis S Maruyama, PE Mandelare-Ruiz, M McCauley, W Peng, BG Cho, ... Microbiology Spectrum 10 (3), e01567-22, 2022 | 6 | 2022 |
| Multicellular species environmental DNA (eDNA) research constrained by overfocus on mitochondrial DNA M McCauley, SA Koda, S Loesgen, DJ Duffy Science of The Total Environment 912, 169550, 2024 | 5 | 2024 |
| Metabolomics-Guided Discovery, Isolation, Structure Elucidation, and Bioactivity of Myropeptins C–E from Myrothecium inundatum A Jagels, DA Adpressa, EN Kaweesa, M McCauley, B Philmus, ... Journal of natural products 86 (7), 1723-1735, 2023 | 5 | 2023 |
| Villé ger S, Jackson CR. Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU … M Chiarello, M McCauley PloS one 17 (2), e0264443, 2022 | 5 | 2022 |
| Symbiosis-driven development in an early branching metazoan AH Ohdera, V Avila-Magaña, V Sharp, K Watson, M McCauley, ... bioRxiv, 2022.07. 21.500558, 2022 | 3 | 2022 |
| Rapid pan-biodiversity lifeform and genomic diversity detection from shotgun sequencing of air eDNA DJ Duffy, M McCauley, O Nousias, MR Stammnitz, JA Farrell, SA Koda, ... | | 2025 |
| Chemical Diversity of Aspergillus alliaceus Phenotypes: Discovery of Brominated Bianthrones with Activity against Triple‐Negative Breast Cancer Cell Lines PE Mandelare, SS Yee, DG Icenhour, EN Kaweesa, M McCauley, ... ChemBioChem 25 (20), e202400398, 2024 | | 2024 |
