| Therapeutic target database 2020: enriched resource for facilitating research and early development of targeted therapeutics Y Wang, S Zhang, F Li, Y Zhou, Y Zhang, Z Wang, R Zhang, J Zhu, Y Ren, ... Nucleic acids research 48 (D1), D1031-D1041, 2020 | 859 | 2020 |
| Consistent gene signature of schizophrenia identified by a novel feature selection strategy from comprehensive sets of transcriptomic data Q Yang, B Li, J Tang, X Cui, Y Wang, X Li, J Hu, Y Chen, W Xue, Y Lou, ... Briefings in Bioinformatics 21 (3), 1058-1068, 2020 | 216 | 2020 |
| NOREVA: enhanced normalization and evaluation of time-course and multi-class metabolomic data Q Yang, Y Wang, Y Zhang, F Li, W Xia, Y Zhou, Y Qiu, H Li, F Zhu Nucleic acids research 48 (W1), W436-W448, 2020 | 185 | 2020 |
| ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies J Tang, J Fu, Y Wang, B Li, Y Li, Q Yang, X Cui, J Hong, X Li, Y Chen, ... Briefings in Bioinformatics 21 (2), 621-636, 2020 | 171 | 2020 |
| Clinical trials, progression-speed differentiating features and swiftness rule of the innovative targets of first-in-class drugs YH Li, XX Li, JJ Hong, YX Wang, JB Fu, H Yang, CY Yu, FC Li, J Hu, ... Briefings in Bioinformatics 21 (2), 649-662, 2020 | 167 | 2020 |
| Optimization of metabolomic data processing using NOREVA J Fu, Y Zhang, Y Wang, H Zhang, J Liu, J Tang, Q Yang, H Sun, W Qiu, ... Nature protocols 17 (1), 129-151, 2022 | 163 | 2022 |
| Simultaneous improvement in the precision, accuracy, and robustness of label-free proteome quantification by optimizing data manipulation chains J Tang, J Fu, Y Wang, Y Luo, Q Yang, B Li, G Tu, J Hong, X Cui, Y Chen, ... Molecular & Cellular Proteomics 18 (8), 1683-1699, 2019 | 107 | 2019 |
| MetaFS: performance assessment of biomarker discovery in metaproteomics J Tang, M Mou, Y Wang, Y Luo, F Zhu Briefings in Bioinformatics 22 (3), bbaa105, 2021 | 83 | 2021 |
| Discovery of the consistently well-performed analysis chain for SWATH-MS based pharmacoproteomic quantification J Fu, J Tang, Y Wang, X Cui, Q Yang, J Hong, X Li, S Li, Y Chen, W Xue, ... Frontiers in Pharmacology 9, 681, 2018 | 74 | 2018 |
| Computational advances of tumor marker selection and sample classification in cancer proteomics J Tang, Y Wang, Y Luo, J Fu, Y Zhang, Y Li, Z Xiao, Y Lou, Y Qiu, F Zhu Computational and Structural Biotechnology Journal 18, 2012-2025, 2020 | 49 | 2020 |
| Determining the balance between drug efficacy and safety by the network and biological system profile of its therapeutic target XX Li, J Yin, J Tang, Y Li, Q Yang, Z Xiao, R Zhang, Y Wang, J Hong, ... Frontiers in pharmacology 9, 1245, 2018 | 39 | 2018 |
| Identification of the gene signature reflecting schizophrenia’s etiology by constructing artificial intelligence‐based method of enhanced reproducibility QX Yang, YX Wang, FC Li, S Zhang, YC Luo, Y Li, J Tang, B Li, YZ Chen, ... CNS Neuroscience & Therapeutics 25 (9), 1054-1063, 2019 | 36 | 2019 |
| A task-specific encoding algorithm for RNAs and RNA-associated interactions based on convolutional autoencoder Y Wang, Z Pan, M Mou, W Xia, H Zhang, H Zhang, J Liu, L Zheng, Y Luo, ... Nucleic acids research 51 (21), e110-e110, 2023 | 34 | 2023 |
| Application of machine learning in spatial proteomics M Mou, Z Pan, M Lu, H Sun, Y Wang, Y Luo, F Zhu Journal of Chemical Information and Modeling 62 (23), 5875-5895, 2022 | 32 | 2022 |
| A critical assessment of the feature selection methods used for biomarker discovery in current metaproteomics studies J Tang, Y Wang, J Fu, Y Zhou, Y Luo, Y Zhang, B Li, Q Yang, W Xue, ... Briefings in bioinformatics 21 (4), 1378-1390, 2020 | 32 | 2020 |
| ncRNAInter: a novel strategy based on graph neural network to discover interactions between lncRNA and miRNA H Zhang, Y Wang, Z Pan, X Sun, M Mou, B Zhang, Z Li, H Li, F Zhu Briefings in bioinformatics 23 (6), bbac411, 2022 | 28 | 2022 |
| Biomarker discovery for immunotherapy of pituitary adenomas: enhanced robustness and prediction ability by modern computational tools Q Yang, Y Wang, S Zhang, J Tang, F Li, J Yin, Y Li, J Fu, B Li, Y Luo, ... International Journal of Molecular Sciences 20 (1), 151, 2019 | 28 | 2019 |
| RNAincoder: a deep learning-based encoder for RNA and RNA-associated interaction Y Wang, Z Chen, Z Pan, S Huang, J Liu, W Xia, H Zhang, M Zheng, H Li, ... Nucleic acids research 51 (W1), W509-W519, 2023 | 27 | 2023 |
| Discovery of novel antagonists targeting the DNA binding domain of androgen receptor by integrated docking-based virtual screening and bioassays J Pang, C Shen, W Zhou, Y Wang, L Shan, X Chai, Y Shao, X Hu, F Zhu, ... Acta pharmacologica Sinica 43 (1), 229-239, 2022 | 21 | 2022 |
| Databases for the targeted COVID‐19 therapeutics Y Wang, F Li, Y Zhang, Y Zhou, Y Tan, Y Chen, F Zhu British Journal of Pharmacology 177 (21), 4999, 2020 | 21 | 2020 |
