| eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data EJ Feil, BC Li, DM Aanensen, WP Hanage, BG Spratt Journal of bacteriology 186 (5), 1518-1530, 2004 | 2258 | 2004 |
| Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ... Cell 184 (1), 64-75. e11, 2021 | 1171 | 2021 |
| Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool Á O’Toole, E Scher, A Underwood, B Jackson, V Hill, JT McCrone, ... Virus evolution 7 (2), veab064, 2021 | 1047 | 2021 |
| Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B. 1.617. 2) compared with alpha (B. 1.1. 7) variants of concern: a cohort study KA Twohig, T Nyberg, A Zaidi, S Thelwall, MA Sinnathamby, S Aliabadi, ... The Lancet Infectious Diseases 22 (1), 35-42, 2022 | 937 | 2022 |
| Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes SD Bentley, DM Aanensen, A Mavroidi, D Saunders, E Rabbinowitsch, ... PLoS genetics 2 (3), e31, 2006 | 898 | 2006 |
| Microreact: visualizing and sharing data for genomic epidemiology and phylogeography S Argimón, K Abudahab, RJE Goater, A Fedosejev, J Bhai, C Glasner, ... Microbial genomics 2 (11), e000093, 2016 | 700 | 2016 |
| Occurrence of carbapenemase-producing Klebsiella pneumoniae and Escherichia coli in the European survey of carbapenemase-producing Enterobacteriaceae (EuSCAPE): a prospective … H Grundmann, C Glasner, B Albiger, DM Aanensen, CT Tomlinson, ... The Lancet infectious diseases 17 (2), 153-163, 2017 | 682 | 2017 |
| Geographic Distribution of Staphylococcus aureus Causing Invasive Infections in Europe: A Molecular-Epidemiological Analysis H Grundmann, DM Aanensen, CC Van Den Wijngaard, BG Spratt, ... PLoS medicine 7 (1), e1000215, 2010 | 673 | 2010 |
| Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread S David, S Reuter, SR Harris, C Glasner, T Feltwell, S Argimon, ... Nature microbiology 4 (11), 1919-1929, 2019 | 659 | 2019 |
| Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei D Godoy, G Randle, AJ Simpson, DM Aanensen, TL Pitt, R Kinoshita, ... Journal of clinical microbiology 41 (5), 2068-2079, 2003 | 641 | 2003 |
| Hierarchical and spatially explicit clustering of DNA sequences with BAPS software L Cheng, TR Connor, J Sirén, DM Aanensen, J Corander Molecular biology and evolution 30 (5), 1224-1228, 2013 | 634 | 2013 |
| Recent Asian origin of chytrid fungi causing global amphibian declines SJ O’hanlon, A Rieux, RA Farrer, GM Rosa, B Waldman, A Bataille, ... Science 360 (6389), 621-627, 2018 | 615 | 2018 |
| Phandango: an interactive viewer for bacterial population genomics J Hadfield, NJ Croucher, RJ Goater, K Abudahab, DM Aanensen, ... Bioinformatics 34 (2), 292-293, 2018 | 589 | 2018 |
| Consensus multi-locus sequence typing scheme for Cryptococcus neoformans and Cryptococcus gattii W Meyer, DM Aanensen, T Boekhout, M Cogliati, MR Diaz, MC Esposto, ... Medical mycology 47 (6), 561-570, 2009 | 569 | 2009 |
| A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic MTG Holden, LY Hsu, K Kurt, LA Weinert, AE Mather, SR Harris, ... Genome research 23 (4), 653-664, 2013 | 530 | 2013 |
| Mapping the Global Emergence of Batrachochytrium dendrobatidis, the Amphibian Chytrid Fungus DH Olson, DM Aanensen, KL Ronnenberg, CI Powell, SF Walker, J Bielby, ... PloS one 8 (2), e56802, 2013 | 522 | 2013 |
| EpiCollect: linking smartphones to web applications for epidemiology, ecology and community data collection DM Aanensen, DM Huntley, EJ Feil, F al-Own, BG Spratt PloS one 4 (9), e6968, 2009 | 518 | 2009 |
| Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B. 1.1. 7 B Meng, SA Kemp, G Papa, R Datir, IATM Ferreira, S Marelli, WT Harvey, ... Cell reports 35 (13), 2021 | 477 | 2021 |
| Rapid sequence-based identification of gonococcal transmission clusters in a large metropolitan area IMC Martin, CA Ison, DM Aanensen, KA Fenton, BG Spratt The Journal of infectious diseases 189 (8), 1497-1505, 2004 | 458 | 2004 |
| Dense genomic sampling identifies highways of pneumococcal recombination C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ... Nature genetics 46 (3), 305-309, 2014 | 418 | 2014 |
