متابعة
Romain Lopez
Romain Lopez
Incoming Assistant Professor, New York University
بريد إلكتروني تم التحقق منه على nyu.edu - الصفحة الرئيسية
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
Deep generative modeling for single-cell transcriptomics‏
R Lopez, J Regier, MB Cole, MI Jordan, N Yosef‏
Nature Methods 15 (12), 1053-1058, 2018‏
18892018
Scrublet: computational identification of cell doublets in single-cell transcriptomic data‏
SL Wolock, R Lopez, AM Klein‏
Cell Systems, 357368, 2019‏
18112019
A Python library for probabilistic analysis of single-cell omics data‏
A Gayoso*, R Lopez*, G Xing*, P Boyeau, V Valiollah Pour Amiri, J Hong, ...‏
Nature Biotechnology, 1-4, 2022‏
470*2022
Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models‏
C Xu*, R Lopez*, E Mehlman*, J Regier, MI Jordan, N Yosef‏
Molecular Systems Biology, 2021‏
4552021
Joint probabilistic modeling of single-cell multi-omic data with totalVI‏
A Gayoso*, Z Steier*, R Lopez, J Regier, KL Nazor, A Streets, N Yosef‏
Nature Methods, 2021‏
4092021
DestVI identifies continuums of cell types in spatial transcriptomics data‏
R Lopez*, B Li*, H Keren-Shaul*, P Boyeau, M Kedmi, D Pilzer, A Jelinski, ...‏
Nature Biotechnology, 1-10, 2022‏
168*2022
Information Constraints on Auto-Encoding Variational Bayes‏
R Lopez, J Regier, N Yosef, MI Jordan‏
Advances in Neural Information Processing Systems, 2018‏
1592018
The scverse project provides a computational ecosystem for single-cell omics data analysis‏
I Virshup, D Bredikhin, L Heumos, G Palla, G Sturm, A Gayoso, I Kats, ...‏
Nature Biotechnology, 1-3, 2023‏
1502023
A joint model of unpaired data from scRNA-seq and spatial transcriptomics for imputing missing gene expression measurements‏
R Lopez*, A Nazaret*, M Langevin*, J Samaran*, J Regier*, MI Jordan, ...‏
ICML workshop in Computational Biology, 2019‏
118*2019
Enhancing scientific discoveries in molecular biology with deep generative models‏
R Lopez, A Gayoso, N Yosef‏
Molecular systems biology 16 (9), e9198, 2020‏
792020
Decision-Making with Auto-Encoding Variational Bayes‏
R Lopez, P Boyeau, N Yosef, MI Jordan, J Regier‏
Advances in Neural Information Processing Systems, 2020‏
482020
Learning Causal Representations of Single Cells via Sparse Mechanism Shift Modeling‏
R Lopez, N Tagasovska, S Ra, K Cho, JK Pritchard, A Regev‏
Causal Learning and Reasoning, 2023‏
442023
Large-Scale Differentiable Causal Discovery of Factor Graphs‏
R Lopez, JC Hütter, JK Pritchard, A Regev‏
Advances in Neural Information Processing Systems, 2022‏
442022
An Empirical Bayes Method for Differential Expression Analysis of Single Cells with Deep Generative Models‏
P Boyeau, J Regier, A Gayoso, MI Jordan, R Lopez, N Yosef‏
Proceedings of the National Academy of Sciences, 2023‏
342023
Learning from eXtreme Bandit Feedback‏
R Lopez, I Dhillon, MI Jordan‏
AAAI Conference in Artificial Intelligence, 2021‏
272021
A deep generative model for gene expression profiles from single-cell RNA sequencing‏
R Lopez, J Regier, M Cole, M Jordan, N Yosef‏
NeurIPS workshop in Computational Biology and Bay Area Machine Learning …, 2017‏
24*2017
Cost-Effective Incentive Allocation via Structured Counterfactual Inference‏
R Lopez, C Li, X Yan, J Xiong, MI Jordan, Y Qi, L Song‏
AAAI Conference on Artificial Intelligence, 2020‏
232020
Deep Generative Models for Detecting Differential Expression in Single Cells‏
P Boyeau, R Lopez, J Regier, A Gayoso, MI Jordan, N Yosef‏
Machine Learning in Computational Biology (MLCB) meeting, 2019‏
21*2019
Sequential Optimal Experimental Design of Perturbation Screens Guided by Multi-modal Priors‏
K Huang, R Lopez, JC Hutter, T Kudo, A Rios, A Regev‏
Research in Computational Molecular Biology Conference, 2024‏
142024
NODAGS-Flow: Nonlinear Cyclic Causal Structure Learning‏
MG Sethuraman, R Lopez, R Mohan, F Fekri, T Biancalani, JC Hütter‏
International Conference on Artificial Intelligence and Statistics, 2023‏
142023
يتعذر على النظام إجراء العملية في الوقت الحالي. عاود المحاولة لاحقًا.
مقالات 1–20