Следене
Seth Cheetham
Seth Cheetham
Потвърден имейл адрес: uq.edu.au - Начална страница
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Позовавания
Позовавания
Година
Long noncoding RNAs and the genetics of cancer
SW Cheetham, F Gruhl, JS Mattick, ME Dinger
British journal of cancer 108 (12), 2419-2425, 2013
8582013
Overcoming challenges and dogmas to understand the functions of pseudogenes
SW Cheetham, GJ Faulkner, ME Dinger
Nature Reviews Genetics 21 (3), 191-201, 2020
2532020
Nanopore sequencing enables comprehensive transposable element epigenomic profiling
AD Ewing, N Smits, FJ Sanchez-Luque, J Faivre, PM Brennan, ...
Molecular Cell 80 (5), 915-928. e5, 2020
1552020
LINE-1 evasion of epigenetic repression in humans
FJ Sanchez-Luque, MJHC Kempen, P Gerdes, DB Vargas-Landin, ...
Molecular cell 75 (3), 590-604. e12, 2019
1492019
Cell-type-specific profiling of protein–DNA interactions without cell isolation using targeted DamID with next-generation sequencing
OJ Marshall, TD Southall, SW Cheetham, AH Brand
Nature protocols 11 (9), 1586-1598, 2016
1352016
Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes
DK Gascoigne, SW Cheetham, PB Cattenoz, MB Clark, PP Amaral, ...
Bioinformatics 28 (23), 3042-3050, 2012
942012
DamID as a versatile tool for understanding gene regulation
GN Aughey, SW Cheetham, TD Southall
Development 146 (6), dev173666, 2019
532019
Targeted DamID reveals differential binding of mammalian pluripotency factors
SW Cheetham, WH Gruhn, J van den Ameele, R Krautz, TD Southall, ...
Development 145 (20), dev170209, 2018
512018
Methylartist: tools for visualizing modified bases from nanopore sequence data
SW Cheetham, M Kindlova, AD Ewing
Bioinformatics 38 (11), 3109-3112, 2022
462022
Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome
RL Troskie, Y Jafrani, TR Mercer, AD Ewing, GJ Faulkner, SW Cheetham
Genome biology 22 (1), 146, 2021
382021
The Evx1/Evx1as gene locus regulates anterior-posterior patterning during gastrulation
CC Bell, PP Amaral, A Kalsbeek, GW Magor, KR Gillinder, P Tangermann, ...
Scientific reports 6 (1), 26657, 2016
352016
mRNA vaccine quality analysis using RNA sequencing
HM Gunter, S Idrisoglu, S Singh, DJ Han, E Ariens, JR Peters, T Wong, ...
Nature Communications 14 (1), 5663, 2023
302023
Processed pseudogenes: A substrate for evolutionary innovation: Retrotransposition contributes to genome evolution by propagating pseudogene sequences with rich regulatory …
RL Troskie, GJ Faulkner, SW Cheetham
BioEssays 43 (11), 2100186, 2021
302021
RNA-DamID reveals cell-type-specific binding of roX RNAs at chromatin-entry sites
SW Cheetham, AH Brand
Nature structural & molecular biology 25 (1), 109-114, 2018
282018
High resolution temporal transcriptomics of mouse embryoid body development reveals complex expression dynamics of coding and noncoding loci
BS Gloss, B Signal, SW Cheetham, F Gruhl, DC Kaczorowski, AC Perkins, ...
Scientific reports 7 (1), 6731, 2017
172017
Vasculature organotropism in drug delivery
A Amruta, D Iannotta, SW Cheetham, T Lammers, J Wolfram
Advanced drug delivery reviews 201, 115054, 2023
152023
Reduced chromatin accessibility correlates with resistance to Notch activation
J Van Den Ameele, R Krautz, SW Cheetham, APA Donovan, ...
Nature communications 13 (1), 2210, 2022
142022
The activity of early-life gene regulatory elements is hijacked in aging through pervasive AP-1-linked chromatin opening
R Patrick, M Naval-Sanchez, N Deshpande, Y Huang, J Zhang, X Chen, ...
Cell Metabolism 36 (8), 1858-1881. e23, 2024
122024
Single-molecule simultaneous profiling of DNA methylation and DNA-protein interactions with Nanopore-DamID
SW Cheetham, YMA Jafrani, SB Andersen, N Jansz, M Kindlova, ...
BioRxiv, 2021.08. 09.455753, 2021
122021
Freedom of expression: cell‐type‐specific gene profiling
L Otsuki, SW Cheetham, AH Brand
Wiley Interdisciplinary Reviews: Developmental Biology 3 (6), 429-443, 2014
112014
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