Data-analysis strategies for image-based cell profiling JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ... Nature methods 14 (9), 849-863, 2017 | 711 | 2017 |
Multiplexed protein maps link subcellular organization to cellular states G Gut, MD Herrmann, L Pelkmans Science 361 (6401), eaar7042, 2018 | 463 | 2018 |
Implementing the DICOM standard for digital pathology MD Herrmann, DA Clunie, A Fedorov, SW Doyle, S Pieper, V Klepeis, ... Journal of pathology informatics 9 (1), 37, 2018 | 143 | 2018 |
NCI imaging data commons A Fedorov, WJR Longabaugh, D Pot, DA Clunie, S Pieper, HJWL Aerts, ... Cancer research 81 (16), 4188-4193, 2021 | 67 | 2021 |
Computational pathology in 2030: a Delphi study forecasting the role of AI in pathology within the next decade MA Berbís, DS McClintock, A Bychkov, J Van der Laak, L Pantanowitz, ... EBioMedicine 88, 2023 | 65 | 2023 |
MITI Minimum Information guidelines for highly multiplexed tissue images D Schapiro, C Yapp, A Sokolov, SM Reynolds, YA Chen, D Sudar, Y Xie, ... Nature Methods 19 (3), 262-267, 2022 | 56 | 2022 |
Computer vision for image-based transcriptomics T Stoeger, N Battich, MD Herrmann, Y Yakimovich, L Pelkmans Methods 85, 44-53, 2015 | 46 | 2015 |
A regulatory science initiative to harmonize and standardize digital pathology and machine learning processes to speed up clinical innovation to patients HD Marble, R Huang, SN Dudgeon, A Lowe, MD Herrmann, S Blakely, ... Journal of Pathology Informatics 11 (1), 22, 2020 | 37 | 2020 |
A pathologist-annotated dataset for validating artificial intelligence: a project description and pilot study SN Dudgeon, S Wen, MG Hanna, R Gupta, M Amgad, M Sheth, H Marble, ... Journal of Pathology Informatics 12 (1), 45, 2021 | 34 | 2021 |
A nuclear circularity-based classifier for diagnostic distinction of desmoplastic from spindle cell melanoma in digitized histological images M Schöchlin, SE Weissinger, AR Brandes, M Herrmann, P Möller, ... Journal of pathology informatics 5 (1), 40, 2014 | 34 | 2014 |
Interoperable slide microscopy viewer and annotation tool for imaging data science and computational pathology C Gorman, D Punzo, I Octaviano, S Pieper, WJR Longabaugh, DA Clunie, ... Nature Communications 14 (1), 1572, 2023 | 23 | 2023 |
Highdicom: A python library for standardized encoding of image annotations and machine learning model outputs in pathology and radiology CP Bridge, C Gorman, S Pieper, SW Doyle, JK Lennerz, ... Journal of digital imaging 35 (6), 1719-1737, 2022 | 18 | 2022 |
National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence A Fedorov, WJR Longabaugh, D Pot, DA Clunie, SD Pieper, DL Gibbs, ... RadioGraphics 43 (12), e230180, 2023 | 17 | 2023 |
Current clinical applications and potential perspective of micro-computed tomography in cardiovascular imaging: A systematic scoping review AS Papazoglou, E Karagiannidis, DV Moysidis, G Sofidis, A Bompoti, ... Hellenic Journal of Cardiology 62 (6), 399-407, 2021 | 17 | 2021 |
Quantitative Imaging Informatics for Cancer Research A Fedorov, R Beichel, J Kalpathy-Cramer, D Clunie, M Onken, ... JCO Clinical Cancer Informatics 4, 444-453, 2020 | 16 | 2020 |
Isolated Whipple's endocarditis: an underestimated diagnosis that requires molecular analysis of surgical material MD Herrmann, A Neumayr, A Essig, J Spiess, J Merk, P Möller, A Liebold, ... The Annals of thoracic surgery 98 (1), e1-e3, 2014 | 16 | 2014 |
Integrating the health-care enterprise pathology and laboratory medicine guideline for digital pathology interoperability RC Dash, N Jones, R Merrick, G Haroske, J Harrison, C Sayers, ... Journal of Pathology Informatics 12 (1), 16, 2021 | 14 | 2021 |
Transitory dasatinib-resistant states in KITmut t (8; 21) acute myeloid leukemia cells correlate with altered KIT expression MD Herrmann, JK Lennerz, L Bullinger, S Bartholomae, K Holzmann, ... Experimental hematology 42 (2), 90-100, 2014 | 12 | 2014 |
Volumetric Imaging of Lung Tissue at Micrometer Resolution: Clinical Applications of Micro-CT for the Diagnosis of Pulmonary Diseases A Bompoti, AS Papazoglou, DV Moysidis, N Otountzidis, E Karagiannidis, ... Diagnostics 11 (11), 2075, 2021 | 7 | 2021 |
The NCI Imaging Data Commons as a platform for reproducible research in computational pathology DP Schacherer, MD Herrmann, DA Clunie, H Höfener, W Clifford, ... Computer methods and programs in biomedicine 242, 107839, 2023 | 6 | 2023 |