| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 17574 | 2012 |
| Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position JD Buenrostro, PG Giresi, LC Zaba, HY Chang, WJ Greenleaf Nature methods 10 (12), 1213-1218, 2013 | 6479 | 2013 |
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007 | 6122 | 2007 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011 | 1499 | 2011 |
| FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin PG Giresi, J Kim, RM McDaniell, VR Iyer, JD Lieb Genome research 17 (6), 877-885, 2007 | 1189 | 2007 |
| Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion AT Satpathy, JM Granja, KE Yost, Y Qi, F Meschi, GP McDermott, ... Nature biotechnology 37 (8), 925-936, 2019 | 816 | 2019 |
| Hierarchical mechanisms for direct reprogramming of fibroblasts to neurons OL Wapinski, T Vierbuchen, K Qu, QY Lee, S Chanda, DR Fuentes, ... Cell 155 (3), 621-635, 2013 | 674 | 2013 |
| A map of open chromatin in human pancreatic islets KJ Gaulton, T Nammo, L Pasquali, JM Simon, PG Giresi, MP Fogarty, ... Nature genetics 42 (3), 255-259, 2010 | 656 | 2010 |
| Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ... Genome research 21 (10), 1757-1767, 2011 | 647 | 2011 |
| Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA JM Simon, PG Giresi, IJ Davis, JD Lieb Nature protocols 7 (2), 256-267, 2012 | 394 | 2012 |
| Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae A Azvolinsky, PG Giresi, JD Lieb, VA Zakian Molecular cell 34 (6), 722-734, 2009 | 356 | 2009 |
| Global analysis of gene expression patterns during disuse atrophy in rat skeletal muscle EJ Stevenson, PG Giresi, A Koncarevic, SC Kandarian The Journal of physiology 551 (1), 33-48, 2003 | 352 | 2003 |
| Transposition of native chromatin for personal epigenomics P Giresi, JD Buenrostro, HY Chang, WJ Greenleaf US Patent 10,059,989, 2018 | 321 | 2018 |
| Identification of a molecular signature of sarcopenia PG Giresi, EJ Stevenson, J Theilhaber, A Koncarevic, J Parkington, ... Physiological genomics 21 (2), 253-263, 2005 | 287 | 2005 |
| Isolation of Active Regulatory Elements from Eukaryotic Chromatin Using FAIRE (Formaldehyde‐Assisted Isolation of Regulatory Elements) PG Giresi, JD Lieb Tag‐Based Next Generation Sequencing, 243-255, 2011 | 263 | 2011 |
| ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions NU Rashid, PG Giresi, JG Ibrahim, W Sun, JD Lieb Genome biology 12, 1-20, 2011 | 242 | 2011 |
| Repression of stress-induced LINE-1 expression protects cancer cell subpopulations from lethal drug exposure GD Guler, CA Tindell, R Pitti, C Wilson, K Nichols, TKW Cheung, HJ Kim, ... Cancer cell 32 (2), 221-237. e13, 2017 | 228 | 2017 |
| Chromatin accessibility landscape of cutaneous T cell lymphoma and dynamic response to HDAC inhibitors K Qu, LC Zaba, AT Satpathy, PG Giresi, R Li, Y Jin, R Armstrong, C Jin, ... Cancer cell 32 (1), 27-41. e4, 2017 | 192 | 2017 |
| A novel ATAC-seq approach reveals lineage-specific reinforcement of the open chromatin landscape via cooperation between BAF and p63 X Bao, AJ Rubin, K Qu, J Zhang, PG Giresi, HY Chang, PA Khavari Genome biology 16, 1-17, 2015 | 165 | 2015 |
| Individuality and variation of personal regulomes in primary human T cells K Qu, LC Zaba, PG Giresi, R Li, M Longmire, YH Kim, WJ Greenleaf, ... Cell systems 1 (1), 51-61, 2015 | 163 | 2015 |
Jason D. LiebIndependentПотвърден имейл адрес: berkeley.edu