Следене
Howard M Salis
Howard M Salis
Professor of Biological Engineering and Chemical Engineering, Penn State University
Потвърден имейл адрес: psu.edu - Начална страница
Заглавие
Позовавания
Позовавания
Година
Automated design of synthetic ribosome binding sites to control protein expression
HM Salis, EA Mirsky, CA Voigt
Nature biotechnology 27 (10), 946-950, 2009
21632009
A synthetic genetic edge detection program
JJ Tabor, HM Salis, ZB Simpson, AA Chevalier, A Levskaya, EM Marcotte, ...
Cell 137 (7), 1272-1281, 2009
6252009
Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites
A Espah Borujeni, AS Channarasappa, HM Salis
Nucleic acids research 42 (4), 2646-2659, 2014
5572014
The ribosome binding site calculator
HM Salis
Methods in enzymology 498, 19-42, 2011
5252011
Accurate hybrid stochastic simulation of a system of coupled chemical or biochemical reactions
H Salis, Y Kaznessis
The Journal of chemical physics 122 (5), 2005
4332005
Efficient Search, Mapping, and Optimization of Multi-protein Genetic Systems in Diverse Bacteria
I Farasat, M Kushwaha, J Collens, M Easterbrook, M Guido, HM Salis
Molecular Systems Biology 10 (6), 2014
2872014
Rational design of a synthetic Entner–Doudoroff pathway for improved and controllable NADPH regeneration
CY Ng, I Farasat, CD Maranas, HM Salis
Metabolic engineering 29, 86-96, 2015
2282015
Automated physics-based design of synthetic riboswitches from diverse RNA aptamers
A Espah Borujeni, DM Mishler, J Wang, W Huso, HM Salis
Nucleic acids research 44 (1), 1-13, 2016
1852016
An automated model test system for systematic development and improvement of gene expression models
AC Reis, HM Salis
ACS Synthetic Biology, 2020
1752020
Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences
A Espah Borujeni, D Cetnar, I Farasat, A Smith, N Lundgren, HM Salis
Nucleic acids research 45 (9), 5437-5448, 2017
1712017
Translation initiation is controlled by RNA folding kinetics via a ribosome drafting mechanism
A Espah Borujeni, HM Salis
Journal of the American Chemical Society 138 (22), 7016-7023, 2016
1642016
Simultaneous repression of multiple bacterial genes using nonrepetitive extra-long sgRNA arrays
AC Reis, SM Halper, GE Vezeau, DP Cetnar, A Hossain, PR Clauer, ...
Nature biotechnology 37 (11), 1294-1301, 2019
1502019
Reversing methanogenesis to capture methane for liquid biofuel precursors
VWC Soo, MJ McAnulty, A Tripathi, F Zhu, L Zhang, E Hatzakis, PB Smith, ...
Microbial cell factories 15, 1-14, 2016
1482016
Kinetic buffering of cross talk between bacterial two-component sensors
ES Groban, EJ Clarke, HM Salis, SM Miller, CA Voigt
Journal of molecular biology 390 (3), 380-393, 2009
1462009
A portable expression resource for engineering cross-species genetic circuits and pathways
M Kushwaha, HM Salis
Nature communications 6 (1), 7832, 2015
1382015
Automated model-predictive design of synthetic promoters to control transcriptional profiles in bacteria
TL LaFleur, A Hossain, HM Salis
Nature communications 13 (1), 5159, 2022
1322022
A biophysical model of CRISPR/Cas9 activity for rational design of genome editing and gene regulation
I Farasat, HM Salis
PLoS computational biology 12 (1), e1004724, 2016
1302016
Automated design of thousands of nonrepetitive parts for engineering stable genetic systems
A Hossain, E Lopez, SM Halper, DP Cetnar, AC Reis, D Strickland, ...
Nature biotechnology 38 (12), 1466-1475, 2020
1242020
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
H Salis, V Sotiropoulos, YN Kaznessis
BMC bioinformatics 7, 1-21, 2006
1192006
A predictive biophysical model of translational coupling to coordinate and control protein expression in bacterial operons
T Tian, HM Salis
Nucleic acids research 43 (14), 7137-7151, 2015
1102015
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Статии 1–20