Следене
Andrei Slabodkin
Andrei Slabodkin
Потвърден имейл адрес: uio.no
Заглавие
Позовавания
Позовавания
Година
A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding
R Akbar, PA Robert, M Pavlović, JR Jeliazkov, I Snapkov, A Slabodkin, ...
Cell Reports 34 (11), 2021
1932021
In silico proof of principle of machine learning-based antibody design at unconstrained scale
R Akbar, PA Robert, CR Weber, M Widrich, R Frank, M Pavlović, ...
MAbs 14 (1), 2031482, 2022
1102022
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires
M Pavlović, L Scheffer, K Motwani, C Kanduri, R Kompova, N Vazov, ...
Nature Machine Intelligence 3 (11), 936-944, 2021
752021
Unconstrained generation of synthetic antibody–antigen structures to guide machine learning methodology for antibody specificity prediction
PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ...
Nature Computational Science 2 (12), 845-865, 2022
73*2022
Individualized VDJ recombination predisposes the available Ig sequence space
A Slabodkin, M Chernigovskaya, I Mikocziova, R Akbar, L Scheffer, ...
Genome Research 31 (12), 2209-2224, 2021
342021
In silico proof of principle of machine learning-based antibody design at unconstrained scale. mAbs 14: 2031482
R Akbar, PA Robert, CR Weber, M Widrich, R Frank, M Pavlović, ...
DOI: https://doi. org/10.1080/19420862.2022 2031482, 2022
62022
Baselining the buzz Trastuzumab-HER2 affinity, and beyond
L Chinery, AM Hummer, BB Mehta, R Akbar, P Rawat, A Slabodkin, ...
BioRxiv, 2024.03. 26.586756, 2024
52024
In silico proof of principle of machine learning-based antibody design at unconstrained scale. bioRxiv 2021
R Akbar, PA Robert, CR Weber, M Widrich, R Frank, M Pavlović, ...
Academic Search, 0
5
Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning
M Chernigovskaya, M Pavlović, C Kanduri, S Gielis, PA Robert, L Scheffer, ...
Nucleic Acids Research 53 (3), gkaf025, 2025
42025
MHC heterozygosity limits T cell receptor variability in CD4 T cells
AJ Brown, J White, L Shaw, J Gross, A Slabodkin, E Kushner, V Greiff, ...
Science Immunology 9 (97), eado5295, 2024
3*2024
Manufacturing-aware generative model architectures enable biological sequence design and synthesis at Petascale
EN Weinstein, MG Gollub, A Slabodkin, CL Gardner, K Dobbs, XB Cui, ...
bioRxiv, 2024.09. 13.612900, 2024
32024
Weakly supervised identification and generation of adaptive immune receptor sequences associated with immune disease status
A Slabodkin, LM Sollid, GK Sandve, PA Robert, V Greiff
bioRxiv, 2023.09. 24.558823, 2023
32023
Global genotype by environment prediction competition reveals that diverse modeling strategies can deliver satisfactory maize yield estimates
JD Washburn, JI Varela, A Xavier, Q Chen, D Ertl, JL Gage, JB Holland, ...
Genetics 229 (2), iyae195, 2025
12025
Atypical memory B cells form a pre-plasmacellular reservoir for steady-state IgD responses to common nasopharyngeal antigens
R Tachó-Piñot, H Bashour, M Filipska, S Tejedor-Vaquero, ...
bioRxiv, 2023.08. 29.554748, 2023
2023
OPEN ACCESS llArticle A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding
R Akbar, PA Robert, M Pavlovic, JR Jeliazkov, I Snapkov, A Slabodkin, ...
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