Charlotte Soneson

Получаване на мой собствен потребителски профил

Позовавания

	Всички	От 2020
Позовавания	18096	13446
h-индекс	44	36
i10-индекс	72	64

2900

1450

725

2175

201320142015201620172018201920202021202220232024202566 160 271 491 806 1121 1570 2020 2627 2718 2648 2892 533

Публичен достъп

Преглед на всички

60 статии

4 статии

налични

неналични

Въз основа на изисквания при финансирането

Съавтори

Mark D. RobinsonFull Professor of Statistical Genomics, University of ZurichПотвърден имейл адрес: mls.uzh.ch
Mauro DelorenziSIB Swiss Institute of BioinformaticsПотвърден имейл адрес: unil.ch
Michael I. LoveAssociate Professor, Biostatistics & Genetics, UNC-Chapel HillПотвърден имейл адрес: email.unc.edu
Rob PatroAssociate Professor, Department of Computer Science, University of MarylandПотвърден имейл адрес: cs.umd.edu
Magnus FontesGeneral Manager Institut Roche, Professor of Mathematics, Lund UniversityПотвърден имейл адрес: roche.com
Helena L. CrowellPostdoc - CNAG, Barcelona, SpainПотвърден имейл адрес: cnag.eu
Kevin RUE-ALBRECHTOxford UniversityПотвърден имейл адрес: imm.ox.ac.uk
Davide RissoDepartment of Statistical Sciences, University of Padova, ItalyПотвърден имейл адрес: unipd.it
Koen Van den BergeJ&J Innovative MedicineПотвърден имейл адрес: berkeley.edu
Lieven ClementAssociate Professor in Statistical Genomics, Ghent UniversityПотвърден имейл адрес: ugent.be
Stephanie C. HicksAssociate Professor, Johns Hopkins Bloomberg School of Public HealthПотвърден имейл адрес: jhu.edu
Michael B. StadlerHead of Computational Biology, Friedrich Miescher Institute for Biomedical Research, SwitzerlandПотвърден имейл адрес: fmi.ch
Federico MariniBioinformatics Group Leader@Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI)Потвърден имейл адрес: uni-mainz.de
Aaron LunGenentech, Inc.Потвърден имейл адрес: gene.com
Raphael GottardoLausanne University Hospital and University of LausanneПотвърден имейл адрес: chuv.ch
Wolfgang HuberEMBL - European Molecular Biology LaboratoryПотвърден имейл адрес: embl.org
Robert A. Amezquita, PhDSr Computational ImmunologistПотвърден имейл адрес: pfizer.com
Levi WaldronCity University of New York Graduate School of Public Health and Health PolicyПотвърден имейл адрес: sph.cuny.edu
Ludwig GeistlingerCenter for Computational Biomedicine, Harvard Medical SchoolПотвърден имейл адрес: hms.harvard.edu
Lindsay N. CarppFred Hutchinson Cancer Research CenterПотвърден имейл адрес: fredhutch.org

Следене

Charlotte Soneson

Research Associate, FMI, Basel

Потвърден имейл адрес: fmi.ch - Начална страница


Заглавие Сортиране по цитати Сортиране по година Сортиране по заглавие	Позовавания Позовавания	Година
The consensus molecular subtypes of colorectal cancer J Guinney, R Dienstmann, X Wang, A De Reynies, A Schlicker, ... Nature medicine 21 (11), 1350-1356, 2015	5090	2015
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences C Soneson, MI Love, MD Robinson F1000Research 4, 1521, 2016	4216	2016
A comparison of methods for differential expression analysis of RNA-seq data C Soneson, M Delorenzi BMC bioinformatics 14, 1-18, 2013	1150	2013
Orchestrating single-cell analysis with Bioconductor RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ... Nature methods 17 (2), 137-145, 2020	813	2020
Bias, robustness and scalability in single-cell differential expression analysis C Soneson, MD Robinson Nature methods 15 (4), 255-261, 2018	763	2018
Distal and proximal colon cancers differ in terms of molecular, pathological, and clinical features E Missiaglia, B Jacobs, G D'ario, AF Di Narzo, C Soneson, E Budinska, ... Annals of oncology 25 (10), 1995-2001, 2014	706	2014
A systematic performance evaluation of clustering methods for single-cell RNA-seq data A Duò, MD Robinson, C Soneson F1000Research 7, 1141, 2020	382	2020
Serum neurofilament light chain in early relapsing remitting MS is increased and correlates with CSF levels and with MRI measures of disease severity J Kuhle, C Barro, G Disanto, A Mathias, C Soneson, G Bonnier, Ö Yaldizli, ... Multiple Sclerosis Journal 22 (12), 1550-1559, 2016	292	2016
Tximeta: Reference sequence checksums for provenance identification in RNA-seq MI Love, C Soneson, PF Hickey, LK Johnson, NT Pierce, L Shepherd, ... PLoS computational biology 16 (2), e1007664, 2020	273	2020
muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data HL Crowell, C Soneson, PL Germain, D Calini, L Collin, C Raposo, ... Nature communications 11 (1), 6077, 2020	270	2020
A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes C Soneson, Y Yao, A Bratus-Neuenschwander, A Patrignani, ... Nature communications 10 (1), 3359, 2019	238	2019
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications K Van den Berge, F Perraudeau, C Soneson, MI Love, D Risso, JP Vert, ... Genome biology 19, 1-17, 2018	228	2018
Long-lasting stem cell–like memory CD8⁺ T cells with a naïve-like profile upon yellow fever vaccination SA Fuertes Marraco, C Soneson, L Cagnon, PO Gannon, M Allard, ... Science translational medicine 7 (282), 282ra48-282ra48, 2015	223	2015
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering LM Weber, M Nowicka, C Soneson, MD Robinson Communications biology 2 (1), 183, 2019	219	2019
Alignment and mapping methodology influence transcript abundance estimation A Srivastava, L Malik, H Sarkar, M Zakeri, F Almodaresi, C Soneson, ... Genome biology 21, 1-29, 2020	185	2020
Essential guidelines for computational method benchmarking LM Weber, W Saelens, R Cannoodt, C Soneson, A Hapfelmeier, ... Genome biology 20, 1-12, 2019	170	2019
RNA sequencing data: hitchhiker's guide to expression analysis K Van den Berge, KM Hembach, C Soneson, S Tiberi, L Clement, MI Love, ... Annual Review of Biomedical Data Science 2 (1), 139-173, 2019	166	2019
Isoform prefiltering improves performance of count-based methods for analysis of differential transcript usage C Soneson, KL Matthes, M Nowicka, CW Law, MD Robinson Genome biology 17, 1-15, 2016	157	2016
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification MI Love, C Soneson, R Patro F1000Research 7, 952, 2018	139	2018
Modulation of mTOR signalling triggers the formation of stem cell-like memory T cells G Scholz, C Jandus, L Zhang, C Grandclément, IC Lopez-Mejia, ... EBioMedicine 4, 50-61, 2016	123	2016

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