| Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics M Wilhelm, DP Zolg, M Graber, S Gessulat, T Schmidt, K Schnatbaum, ... Nature communications 12 (1), 3346, 2021 | 162 | 2021 |
| Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target S Lechner, MIP Malgapo, C Grätz, RR Steimbach, A Baron, P Rüther, ... Nature chemical biology 18 (8), 812-820, 2022 | 70 | 2022 |
| Decrypting drug actions and protein modifications by dose-and time-resolved proteomics J Zecha, FP Bayer, S Wiechmann, J Woortman, N Berner, J Müller, ... Science 380 (6640), 93-101, 2023 | 62 | 2023 |
| ProteomicsDB: toward a FAIR open-source resource for life-science research L Lautenbacher, P Samaras, J Muller, A Grafberger, M Shraideh, J Rank, ... Nucleic Acids Research 50 (D1), D1541-D1552, 2022 | 52 | 2022 |
| Mass spectrometry-based draft of the mouse proteome P Giansanti, P Samaras, Y Bian, C Meng, A Coluccio, M Frejno, ... Nature methods 19 (7), 803-811, 2022 | 46 | 2022 |
| Oktoberfest: Open‐source spectral library generation and rescoring pipeline based on Prosit M Picciani, W Gabriel, VG Giurcoiu, O Shouman, F Hamood, ... Proteomics 24 (8), 2300112, 2024 | 33 | 2024 |
| Prosit-TMT: deep learning boosts identification of TMT-labeled peptides W Gabriel, M The, DP Zolg, FP Bayer, O Shouman, L Lautenbacher, ... Analytical Chemistry 94 (20), 7181-7190, 2022 | 24 | 2022 |
| Predicting fragment intensities and retention time of iTRAQ‐and TMTPro‐labeled peptides with Prosit‐TMT W Gabriel, V Giurcoiu, L Lautenbacher, M Wilhelm Proteomics 22 (19-20), 2100257, 2022 | 6 | 2022 |
| Proceedings of the EuBIC-MS 2020 Developers’ Meeting C Ashwood, W Bittremieux, EW Deutsch, NT Doncheva, V Dorfer, ... EuPA Open Proteomics 24, 1-6, 2020 | 6 | 2020 |
| Koina: Democratizing machine learning for proteomics research L Lautenbacher, KL Yang, T Kockmann, C Panse, M Chambers, E Kahl, ... bioRxiv, 2024 | 4 | 2024 |
| Proceedings of the EuBIC-MS developers meeting 2023 P Beltrao, T Van Den Bossche, R Gabriels, T Holstein, T Kockmann, ... Journal of Proteomics 305, 105246, 2024 | | 2024 |
| Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target (Apr, 10.1038/s41589-022-01015-5, 2022) S Lechner, MIP Malgapo, C Graetz, RR Steimbach, A Baron, P Ruether, ... NATURE CHEMICAL BIOLOGY 18 (8), 913-913, 2022 | | 2022 |
| Prosit boosts mass spectrometry-based proteomics one spectrum at a time M Wilhelm, W Gabriel, O Shouman, V Sternlicht, L Lautenbacher MOLECULAR & CELLULAR PROTEOMICS 21 (8), S23-S23, 2022 | | 2022 |
Mathias WilhelmComputational Mass Spectrometry, Technical University of MunichПотвърден имейл адрес: tum.de