| Increased LCN2 (lipocalin 2) in the RPE decreases autophagy and activates inflammasome-ferroptosis processes in a mouse model of dry AMD U Gupta, S Ghosh, CT Wallace, P Shang, Y Xin, AP Nair, M Yazdankhah, ... Autophagy 19 (1), 92-111, 2023 | 98 | 2023 |
| Multistability in the epithelial-mesenchymal transition network Y Xin, B Cummins, T Gedeon BMC bioinformatics 21, 1-17, 2020 | 36 | 2020 |
| Oscillations in epidemic models with spread of awareness W Just, J Saldaña, Y Xin Journal of Mathematical Biology 76, 1027-1057, 2018 | 26 | 2018 |
| Microglia–neutrophil interactions drive dry AMD-like pathology in a mouse model M Boyce, Y Xin, O Chowdhury, P Shang, H Liu, V Koontz, A Strizhakova, ... Cells 11 (22), 3535, 2022 | 17 | 2022 |
| LRLoop: a method to predict feedback loops in cell–cell communication Y Xin, P Lyu, J Jiang, F Zhou, J Wang, S Blackshaw, J Qian Bioinformatics 38 (17), 4117-4126, 2022 | 15 | 2022 |
| Open-minded imitation can achieve near-optimal vaccination coverage Y Xin, D Gerberry, W Just Journal of Mathematical Biology 79 (4), 1491-1514, 2019 | 8 | 2019 |
| Retinal pigment epithelium transcriptome analysis in chronic smoking reveals a suppressed innate immune response and activation of differentiation pathways L Wang, KD Kaya, S Kim, MJ Brooks, J Wang, Y Xin, J Qian, A Swaroop, ... Free Radical Biology and Medicine 156, 176-189, 2020 | 3 | 2020 |
| Intercellular communication atlas reveals Oprm1 as a neuroprotective factor for retinal ganglion cells C Qian, Y Xin, C Qi, H Wang, BC Dong, DJ Zack, S Blackshaw, S Hattar, ... Nature communications 15 (1), 2206, 2024 | 2 | 2024 |
| Influence of awareness that results from direct experience on the spread of epidemics Y Xin arXiv preprint arXiv:1611.05100, 2016 | 2 | 2016 |
| The preferential attachment model W Just, H Callender, MD LaMar, Y Xin | 2 | 2015 |
| LRLoop: Feedback loops as a design principle of cell-cell communication Y Xin, P Lyu, J Jiang, F Zhou, J Wang, S Blackshaw, J Qian bioRxiv, 2022.02. 04.479174, 2022 | 1 | 2022 |
| Limsup is needed in the definitions of topological entropy via spanning or separation numbers W Just, Y Xin Dynamical Systems 35 (3), 430-489, 2020 | 1 | 2020 |
| Development of epithelial tissues: How are cleavage planes chosen? Y Xin, CM Karunarathna Mudiyanselage, W Just Plos one 13 (11), e0205834, 2018 | 1 | 2018 |
| Should I get a flu shot? How well did this go last year? W Just, D Gerberry, Y Xin | 1 | 2018 |
| On the role of limsup in the definition of topological entropy via spanning or separation numbers. Part I: Basic examples W Just, Y Xin arXiv preprint arXiv:1707.09052, 2017 | 1 | 2017 |
| Exploring random regular graphs with IONTW W Just, H Callender, D LaMar, Y Xin | 1 | 2015 |
| A quick tour of IONTW W Just, Y Xin | 1 | 2015 |
| Attenuated adenosine mediated immune-dampening increases natural killer cell activity in early age-related macular degeneration AP Nair, S Ghosh, VS Babu, M Praveen, Y Xin, GR Sahu, TA Vaidya, ... bioRxiv, 2025.01. 22.634301, 2025 | | 2025 |
| Activated mTOR Signaling in the RPE Drives EMT, Autophagy, and Metabolic Disruption, Resulting in AMD‐Like Pathology in Mice O Chowdhury, S Bammidi, P Gautam, VS Babu, H Liu, P Shang, Y Xin, ... Aging Cell, e70018, 2025 | | 2025 |
| MetaLigand: A database for predicting non-peptide ligand mediated cell-cell communication Y Xin, Y Jin, C Qian, S Blackshaw, J Qian bioRxiv, 2025.01. 14.633094, 2025 | | 2025 |
