| Comparing community structure to characteristics in online collegiate social networks V Red, ED Kelsic, PJ Mucha, MA Porter SIAM review 53 (3), 526-543, 2011 | 676 | 2011 |
| Spatiotemporal microbial evolution on antibiotic landscapes M Baym, TD Lieberman, ED Kelsic, R Chait, R Gross, I Yelin, R Kishony Science 353 (6304), 1147-1151, 2016 | 614 | 2016 |
| High-order species interactions shape ecosystem diversity E Bairey, ED Kelsic, R Kishony Nature communications 7 (1), 12285, 2016 | 434 | 2016 |
| Comprehensive AAV capsid fitness landscape reveals a viral gene and enables machine-guided design PJ Ogden, ED Kelsic, S Sinai, GM Church Science 366 (6469), 1139-1143, 2019 | 361 | 2019 |
| Counteraction of antibiotic production and degradation stabilizes microbial communities ED Kelsic, J Zhao, K Vetsigian, R Kishony Nature 521 (7553), 516-519, 2015 | 344 | 2015 |
| Deep diversification of an AAV capsid protein by machine learning DH Bryant, A Bashir, S Sinai, NK Jain, PJ Ogden, PF Riley, GM Church, ... Nature Biotechnology 39 (6), 691-696, 2021 | 296 | 2021 |
| High-throughput creation and functional profiling of DNA sequence variant libraries using CRISPR–Cas9 in yeast X Guo, A Chavez, A Tung, Y Chan, C Kaas, Y Yin, R Cecchi, SL Garnier, ... Nature biotechnology 36 (6), 540-546, 2018 | 104 | 2018 |
| Variational auto-encoding of protein sequences S Sinai, E Kelsic, GM Church, MA Nowak arXiv preprint arXiv:1712.03346, 2017 | 86 | 2017 |
| Adalead: A simple and robust adaptive greedy search algorithm for sequence design S Sinai, R Wang, A Whatley, S Slocum, E Locane, ED Kelsic arXiv preprint arXiv:2010.02141, 2020 | 82 | 2020 |
| RNA structural determinants of optimal codons revealed by MAGE-Seq ED Kelsic, H Chung, N Cohen, J Park, HH Wang, R Kishony Cell systems 3 (6), 563-571. e6, 2016 | 80 | 2016 |
| Escape mutations circumvent a tradeoff between resistance to a beta-lactam and resistance to a beta-lactamase inhibitor D Russ, F Glaser, E Shaer Tamar, I Yelin, M Baym, ED Kelsic, ... Nature Communications 11 (1), 2029, 2020 | 37 | 2020 |
| A primer on model-guided exploration of fitness landscapes for biological sequence design S Sinai, ED Kelsic arXiv preprint arXiv:2010.10614, 2020 | 35 | 2020 |
| Generative AAV capsid diversification by latent interpolation S Sinai, N Jain, GM Church, ED Kelsic bioRxiv, 2021.04. 16.440236, 2021 | 27 | 2021 |
| Overcoming immunological challenges limiting capsid-mediated gene therapy with machine learning AZ Wec, KS Lin, JC Kwasnieski, S Sinai, J Gerold, ED Kelsic Frontiers in Immunology 12, 674021, 2021 | 24 | 2021 |
| Challenges and opportunities of machine-guided capsid engineering for gene therapy ED Kelsic, GM Church Cell Gene Ther Insights 5 (4), 523-36, 2019 | 14 | 2019 |
| Understanding complex networks with community finding algorithms ED Kelsic SURF, 2005 | 11 | 2005 |
| Community structure in online collegiate social networks, eprint AL Traud, ED Kelsic, PJ Mucha, MA Porter arXiv preprint arXiv:0809.0690, 2009 | 6 | 2009 |
| Deep Search: Next-Gen Strategies for Accelerating AAV Capsid Engineering E Kelsic, S Sinai, P Ogden, M Nowak, G Church MOLECULAR THERAPY 26 (5), 168-168, 2018 | 2 | 2018 |
| High-throughput creation and functional profiling of eukaryotic DNA sequence variant libraries using CRISPR/Cas9 X Guo, A Chavez, A Tung, Y Chan, R Cecchi, SL Garnier, C Kaas, ... bioRxiv, 195776, 2017 | 2 | 2017 |
| Viral vectors exhibiting improved gene delivery properties GM Church, E Kelsic, P Ogden, S Sinai US Patent App. 17/055,318, 2021 | 1 | 2021 |