Quality of automated program repair on real-world defects M Motwani, M Soto, Y Brun, R Just, C Le Goues IEEE Transactions on Software Engineering 48 (2), 637-661, 2020 | 70 | 2020 |
A deeper look into bug fixes: patterns, replacements, deletions, and additions M Soto, F Thung, CP Wong, C Le Goues, D Lo Proceedings of the 13th International Conference on Mining Software …, 2016 | 67 | 2016 |
Inferring cancer progression from single-cell sequencing while allowing mutation losses S Ciccolella, C Ricketts, M Soto Gomez, M Patterson, D Silverbush, ... Bioinformatics 37 (3), 326-333, 2021 | 52 | 2021 |
Using a probabilistic model to predict bug fixes M Soto, C Le Goues 2018 IEEE 25th International Conference on Software Analysis, Evolution and …, 2018 | 42 | 2018 |
Observing and Predicting Knowledge Worker Stress, Focus and Awakeness in the Wild M Soto, C Satterfield, T Fritz, GC Murphy, DC Shepherd, N Kraft International Journal of Human-Computer Studies 146, 2021 | 31 | 2021 |
Beyond perfect phylogeny: Multisample phylogeny reconstruction via ilp P Bonizzoni, S Ciccolella, G Della Vedova, M Soto Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017 | 26 | 2017 |
Does relaxing the infinite sites assumption give better tumor phylogenies? An ILP-based comparative approach P Bonizzoni, S Ciccolella, G Della Vedova, M Soto IEEE/ACM transactions on computational biology and bioinformatics 16 (5 …, 2018 | 23 | 2018 |
The promises of large language models for protein design and modeling G Valentini, D Malchiodi, J Gliozzo, M Mesiti, M Soto-Gomez, A Cabri, ... Frontiers in Bioinformatics 3, 1304099, 2023 | 20 | 2023 |
Language impact on productivity for industrial end users: A case study from Programmable Logic Controllers F Fronchetti, N Ritschel, R Holmes, L Li, M Soto, R Jetley, I Wiese, ... Journal of Computer Languages 69, 101087, 2022 | 19 | 2022 |
gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data S Ciccolella, M Soto Gomez, MD Patterson, G Della Vedova, ... BMC bioinformatics 21, 1-16, 2020 | 19 | 2020 |
A meta-graph for the construction of an rna-centered knowledge graph E Cavalleri, S Bonfitto, A Cabri, J Gliozzo, P Perlasca, M Soto-Gomez, ... International Work-Conference on Bioinformatics and Biomedical Engineering …, 2023 | 12 | 2023 |
Analyzing the impact of social attributes on commit integration success M Soto, Z Coker, C Le Goues 2017 IEEE/ACM 14th International Conference on Mining Software Repositories …, 2017 | 10 | 2017 |
Improving Patch Quality by Enhancing Key Components of Automatic Program Repair M Soto Automated Software Engineering (Doctoral Symposium), 2019 | 9 | 2019 |
Common statement kind changes to inform automatic program repair M Soto, C Le Goues Proceedings of the 15th International Conference on Mining Software …, 2018 | 8 | 2018 |
Type vector representations from text: An empirical analysis F Bianchi, M Soto Gomez, M Palmonari, V Cutrona CEUR WORKSHOP PROCEEDINGS 2106, 73-83, 2018 | 8 | 2018 |
Applying Data Science to Improve Solar Power Production and Reliability Mauricio Soto, Karen Smiley, Xiao Qu, Travis Galoppo, Rohini Kapoor, Alok ... INFORMS Workshop on Data Science 2019, 2019 | 6 | 2019 |
Character-based phylogeny construction and its application to tumor evolution G Della Vedova, M Patterson, R Rizzi, M Soto Unveiling Dynamics and Complexity: 13th Conference on Computability in …, 2017 | 6 | 2017 |
An ontology-based knowledge graph for representing interactions involving RNA molecules E Cavalleri, A Cabri, M Soto-Gomez, S Bonfitto, P Perlasca, J Gliozzo, ... Scientific Data 11 (1), 906, 2024 | 5 | 2024 |
RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules E Cavalleri, A Cabri, M Soto-Gomez, S Bonfitto, P Perlasca, J Gliozzo, ... arXiv preprint arXiv:2312.00183, 2023 | 5 | 2023 |
SPIREX: Improving LLM-based relation extraction from RNA-focused scientific literature using graph machine learning E Cavalleri, M Soto Gomez, A Pashaeibarough, D Malchiodi, JH Caufield, ... Proceedings of Workshops at the 50th International Conference on Very Large …, 2024 | 3 | 2024 |