| BMP, Wnt and FGF signals are integrated through evolutionarily conserved enhancers to achieve robust expression of Pax3 and Zic genes at the zebrafish neural plate border AT Garnett, TA Square, DM Medeiros Development 139 (22), 4220-4231, 2012 | 111 | 2012 |
| Evolution of the new vertebrate head by co-option of an ancient chordate skeletal tissue D Jandzik, AT Garnett, TA Square, MV Cattell, JK Yu, DM Medeiros Nature 518 (7540), 534-537, 2015 | 103 | 2015 |
| CRISPR/Cas9-mediated mutagenesis in the sea lamprey Petromyzon marinus: a powerful tool for understanding ancestral gene functions in vertebrates T Square, M Romášek, D Jandzik, MV Cattell, M Klymkowsky, ... Development 142 (23), 4180-4187, 2015 | 93 | 2015 |
| Roles for FGF in lamprey pharyngeal pouch formation and skeletogenesis highlight ancestral functions in the vertebrate head D Jandzik, MB Hawkins, MV Cattell, R Cerny, TA Square, DM Medeiros Development 141 (3), 629-638, 2014 | 56 | 2014 |
| A gene expression map of the larval Xenopus laevis head reveals developmental changes underlying the evolution of new skeletal elements T Square, D Jandzik, M Cattell, A Coe, J Doherty, DM Medeiros Developmental Biology 397 (2), 293-304, 2015 | 53 | 2015 |
| The origin and diversification of the developmental mechanisms that pattern the vertebrate head skeleton T Square, D Jandzik, M Romášek, R Cerny, DM Medeiros Developmental biology 427 (2), 219-229, 2017 | 44 | 2017 |
| Evolution of the endothelin pathway drove neural crest cell diversification TA Square, D Jandzik, JL Massey, M Romášek, HP Stein, AW Hansen, ... Nature 585 (7826), 563-568, 2020 | 38 | 2020 |
| Embryonic expression of endothelins and their receptors in lamprey and frog reveals stem vertebrate origins of complex Endothelin signaling T Square, D Jandzik, M Cattell, A Hansen, DM Medeiros Scientific reports 6 (1), 34282, 2016 | 30 | 2016 |
| Evolution of vertebrate gill covers via shifts in an ancient Pou3f3 enhancer L Barske, P Fabian, C Hirschberger, D Jandzik, T Square, P Xu, N Nelson, ... Proceedings of the National Academy of Sciences 117 (40), 24876-24884, 2020 | 22 | 2020 |
| Distinct tooth regeneration systems deploy a conserved battery of genes TA Square, S Sundaram, EJ Mackey, CT Miller EvoDevo 12, 1-17, 2021 | 20 | 2021 |
| Lamprey lecticans link new vertebrate genes to the origin and elaboration of vertebrate tissues ZD Root, D Jandzik, C Allen, M Brewer, M Romášek, T Square, ... Developmental Biology 476, 282-293, 2021 | 11 | 2021 |
| Evolved Bmp6 enhancer alleles drive spatial shifts in gene expression during tooth development in sticklebacks MD Stepaniak, TA Square, CT Miller Genetics 219 (4), iyab151, 2021 | 9 | 2021 |
| Evolution of Spatial and Temporal cis-Regulatory Divergence in Sticklebacks KL Mack, TA Square, B Zhao, CT Miller, HB Fraser Molecular Biology and Evolution 40 (3), msad034, 2023 | 8 | 2023 |
| Population Genomics of Variegated Toad-Headed Lizard Phrynocephalus versicolor and Its Adaptation to the Colorful Sand of the Gobi Desert Y Jin, D Aguilar-Gómez, D YC Brandt, TA Square, J Li, Z Liu, T Wang, ... Genome biology and evolution 14 (7), evac076, 2022 | 6 | 2022 |
| Site pleiotropy of a stickleback Bmp6 enhancer AJ Rowley, TA Square, CT Miller Developmental biology 492, 111-118, 2022 | 2 | 2022 |
| Neural crest cell development and evolution TA Square University of Colorado at Boulder, 2017 | 2 | 2017 |
| CRISPR/Cas system in the sea lamprey: A tool for understanding ancestral gene functions in vertebrates M Roma'ek, T Square, D Jandzik, DM Medeiros Integrative and Comparative Biology 55, E321-E321, 2015 | 2 | 2015 |
| Modulation of tooth regeneration through opposing responses to Wnt and BMP signals in teleosts TA Square, EJ Mackey, S Sundaram, NC Weksler, ZZ Chen, ... Development 150 (23), 2023 | 1 | 2023 |
| Evolution of spatial and temporal cis-regulatory divergence between marine and freshwater sticklebacks KL Mack, TA Square, B Zhao, CT Miller, HB Fraser bioRxiv, 2022.09. 30.510353, 2022 | | 2022 |
| Site pleiotropy of a stickleback tooth and fin enhancer AJ Rowley, TA Square, CT Miller bioRxiv, 2022.05. 13.491895, 2022 | | 2022 |
