Tomaž Curk

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Blaz ZupanUniversity of LjubljanaCorreu electrònic verificat a fri.uni-lj.si
Jernej UleThe Francis Crick Institute, UK Dementia Research Institute at King's, Institute of ChemistryCorreu electrònic verificat a crick.ac.uk
Gregor RotBioinformatics Scientist, ETH Zürich, SwitzerlandCorreu electrònic verificat a ethz.ch
Nicholas LuscombeOkinawa Institute of Science and Technology Graduate UniversityCorreu electrònic verificat a oist.jp
Kathi ZarnackJulius Maximilians University WürzburgCorreu electrònic verificat a uni-wuerzburg.de
Julian KönigJulius Maximilian University of WürzburgCorreu electrònic verificat a uni-wuerzburg.de
Uros PetrovicFull Professor (Genetics, Molecular Biology) and PI (Functional Genomics, Biotechnology)Correu electrònic verificat a ijs.si
Nejc HabermanImperial College Research FellowCorreu electrònic verificat a ic.ac.uk
Boris RogeljProfessorCorreu electrònic verificat a kcl.ac.uk
Christopher E ShawInstitute of Psychiatry, King's College LondonCorreu electrònic verificat a kcl.ac.uk
Marinka ZitnikAssociate Professor, Harvard UniversityCorreu electrònic verificat a hms.harvard.edu
Tomaž HočevarAssoc. Prof., University of LjubljanaCorreu electrònic verificat a fri.uni-lj.si
Chris SibleyEdinburgh UniversityCorreu electrònic verificat a ed.ac.uk
Gregor LebanJozef Stefan InstituteCorreu electrònic verificat a ijs.si
Tibor HortobágyiUniversitätsspital Zürich, CH; University of Debrecen, Hungary; King's College London, UKCorreu electrònic verificat a usz.ch
Lan UmekAssociate Professor, Vice-dean for scientific researchCorreu electrònic verificat a fu.uni-lj.si
Adam KuspaThe Welch FoundationCorreu electrònic verificat a welch1.org
Rickie PataniProfessor, Senior Group Leader, Consultant Neurologist @ The Francis Crick Institute & UCLCorreu electrònic verificat a ucl.ac.uk
Agnes NishimuraKing's College LondonCorreu electrònic verificat a kcl.ac.uk
Alfredo CastellóMRC University of Glasgow Centre for Virus ResearchCorreu electrònic verificat a glasgow.ac.uk

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Tomaž Curk

University of Ljubljana, Faculty of Computer and Information Science

Correu electrònic verificat a fri.uni-lj.si - Pàgina d'inici

Bioinformatics protein-RNA interactions Data Mining Artificial Intelligence


Títol Ordena per cites Ordena per any Ordena per títol	Citada per Citada per	Any
Orange: data mining toolbox in Python J Demšar, T Curk, A Erjavec, Č Gorup, T Hočevar, M Milutinovič, ... the Journal of machine Learning research 14 (1), 2349-2353, 2013	2761	2013
Characterizing the RNA targets and position-dependent splicing regulation by TDP-43 JR Tollervey, T Curk, B Rogelj, M Briese, M Cereda, M Kayikci, J König, ... Nature neuroscience 14 (4), 452-458, 2011	1289	2011
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ... Nature structural & molecular biology 17 (7), 909-915, 2010	1277	2010
Orange: From experimental machine learning to interactive data mining J Demšar, B Zupan, G Leban, T Curk Knowledge Discovery in Databases: PKDD 2004: 8th European Conference on …, 2004	662	2004
Comprehensive identification of RNA-binding domains in human cells A Castello, B Fischer, CK Frese, R Horos, AM Alleaume, S Foehr, T Curk, ... Molecular cell 63 (4), 696-710, 2016	650	2016
The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs BM Beckmann, R Horos, B Fischer, A Castello, K Eichelbaum, ... Nature communications 6 (1), 10127, 2015	490	2015
Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain B Rogelj, LE Easton, GK Bogu, LW Stanton, G Rot, T Curk, B Zupan, ... Scientific reports 2 (1), 603, 2012	336	2012
SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export M Müller-McNicoll, V Botti, AM de Jesus Domingues, H Brandl, ... Genes & development 30 (5), 553-566, 2016	315	2016
The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes ML Änkö, M Müller-McNicoll, H Brandl, T Curk, C Gorup, I Henry, J Ule, ... Genome biology 13, 1-17, 2012	309	2012
ROC curve, lift chart and calibration plot M Vuk, T Curk Metodoloski zvezki 3 (1), 89, 2006	299	2006
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain JR Tollervey, Z Wang, T Hortobágyi, JT Witten, K Zarnack, M Kayikci, ... Genome research 21 (10), 1572-1582, 2011	281	2011
iCLIP predicts the dual splicing effects of TIA-RNA interactions Z Wang, M Kayikci, M Briese, K Zarnack, NM Luscombe, G Rot, B Zupan, ... PLoS biology 8 (10), e1000530, 2010	271	2010
Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions Y Sugimoto, J König, S Hussain, B Zupan, T Curk, M Frye, J Ule Genome biology 13, 1-13, 2012	267	2012
iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution J Konig, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ... Journal of visualized experiments: JoVE, 2638, 2011	249	2011
Conserved developmental transcriptomes in evolutionarily divergent species A Parikh, ER Miranda, M Katoh-Kurasawa, D Fuller, G Rot, L Zagar, ... Genome biology 11, 1-12, 2010	208	2010
Microarray data mining with visual programming T Curk, J Demsar, Q Xu, G Leban, U Petrovic, I Bratko, G Shaulsky, ... Bioinformatics 21 (3), 396-398, 2005	204	2005
The RNA-binding protein HuR is essential for the B cell antibody response MD Diaz-Muñoz, SE Bell, K Fairfax, E Monzon-Casanova, ... Nature immunology 16 (4), 415-425, 2015	180	2015
Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium R Benabentos, S Hirose, R Sucgang, T Curk, M Katoh, EA Ostrowski, ... Current biology 19 (7), 567-572, 2009	174	2009
Recursive splicing in long vertebrate genes CR Sibley, W Emmett, L Blazquez, A Faro, N Haberman, M Briese, ... Nature 521 (7552), 371-375, 2015	173	2015
Yeast as a cell factory: current state and perspectives M Kavšček, M Stražar, T Curk, K Natter, U Petrovič Microbial cell factories 14 (4), 2015	165	2015

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