John Quackenbush

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211 articles

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Benjamin Haibe-KainsScientist (Principal Investigator), Princess Margaret Cancer Centre, University Health NetworkCorreu electrònic verificat a uhnresearch.ca
Kimberly GlassAssociate Scientist, Brigham and Women's Hospital; Assistant Professor of Medicine, Harvard MedicalCorreu electrònic verificat a channing.harvard.edu
Hugo AertsDirector AI in Medicine (AIM) @ Harvard-MGB | Professor @ MaastrichtUCorreu electrònic verificat a dfci.harvard.edu
Joseph A. WhiteDana-Farber Cancer InstituteCorreu electrònic verificat a jimmy.harvard.edu
Alvis BrazmaEMBL Scientist EmeritusCorreu electrònic verificat a ebi.ac.uk
Aedin CulhaneUniversity of Limerick School of MedicineCorreu electrònic verificat a ul.ie
Razvan SultanaBioinformatician, Garvan Institute, Sydney, AustraliaCorreu electrònic verificat a garvan.org.au
Christian StoeckertReseach Professor of Genetics, University of PennsylvaniaCorreu electrònic verificat a upenn.edu
marieke kuijjerUniversity of OsloCorreu electrònic verificat a ncmm.uio.no
Geo PerteaData/Software Engineer, Lieber Institute for Brain DevelopmentCorreu electrònic verificat a jhu.edu
Helen CaustonColumbia UniversityCorreu electrònic verificat a cumc.columbia.edu
Chintan ParmarAstraZeneca (past: PathAI, Novartis, Harvard-DFCI-BWH, ISI-Kolkata, DAIICT)Correu electrònic verificat a astrazeneca.com
John PlatigAssistant Prof. University of VirginiaCorreu electrònic verificat a virginia.edu
Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Senior ScientistCorreu electrònic verificat a ebi.ac.uk
Ronald TaylorSupervisory Biologist (Bioinformatics) at the National Cancer InstituteCorreu electrònic verificat a nih.gov
Ed SilvermanCorreu electrònic verificat a channing.harvard.edu
Gavin SherlockProfessor of Genetics, Stanford UniversityCorreu electrònic verificat a stanford.edu
Paul SpellmanUniversity of California Los AngelesCorreu electrònic verificat a mednet.ucla.edu
Gianluca BontempiFull professor, Machine Learning Group, Université Libre de BruxellesCorreu electrònic verificat a ulb.ac.be
Eleanor A HoweDiamond Age Data ScienceCorreu electrònic verificat a diamondagedatascience.com

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John Quackenbush

Harvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-Farber

Correu electrònic verificat a hsph.harvard.edu

Genomics Bioinformatics Computational Biology Functional Genomics Cancer Genomics


Títol Ordena per cites Ordena per any Ordena per títol	Citada per Citada per	Any
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana Arabidopsis Genome Initiative genomeanalysis@ tgr. org genomeanalysis@ gsf. de nature 408 (6814), 796-815, 2000	11334	2000
TM4: a free, open-source system for microarray data management and analysis AI Saeed, V Sharov, J White, J Li, W Liang, N Bhagabati, J Braisted, ... Biotechniques 34 (2), 374-378, 2003	5480	2003
Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach HJWL Aerts, ER Velazquez, RTH Leijenaar, C Parmar, P Grossmann, ... Nature communications 5 (1), 4006, 2014	5226	2014
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4982	2001
The complete genome sequence of the gastric pathogen Helicobacter pylori JF Tomb, O White, AR Kerlavage, RA Clayton, GG Sutton, ... Nature 388 (6642), 539-547, 1997	4445	1997
The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005	4165	2005
Artificial intelligence in radiology A Hosny, C Parmar, J Quackenbush, LH Schwartz, HJWL Aerts Nature Reviews Cancer 18 (8), 500-510, 2018	3491	2018
Microarray data normalization and transformation J Quackenbush Nature genetics 32 (4), 496-501, 2002	2919	2002
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi CM Fraser, S Casjens, WM Huang, GG Sutton, R Clayton, R Lathigra, ... Nature 390 (6660), 580-586, 1997	2708	1997
Computational analysis of microarray data J Quackenbush Nature reviews genetics 2 (6), 418-427, 2001	2230	2001
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002	2174	2002
Genesis: cluster analysis of microarray data A Sturn, J Quackenbush, Z Trajanoski Bioinformatics 18 (1), 207-208, 2002	2107	2002
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets G Pertea, X Huang, F Liang, V Antonescu, R Sultana, S Karamycheva, ... Bioinformatics 19 (5), 651-652, 2003	1990	2003
The molecular portraits of breast tumors are conserved across microarray platforms Z Hu, C Fan, DS Oh, JS Marron, X He, BF Qaqish, C Livasy, LA Carey, ... BMC genomics 7, 1-12, 2006	1926	2006
[9] TM4 microarray software suite AI Saeed, NK Bhagabati, JC Braisted, W Liang, V Sharov, EA Howe, J Li, ... Methods in enzymology 411, 134-193, 2006	1878	2006
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors JI Herschkowitz, K Simin, VJ Weigman, I Mikaelian, J Usary, Z Hu, ... Genome biology 8, 1-17, 2007	1738	2007
Corrections: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ... Nature 394 (6688), 101, 1998	1738*	1998
A concise guide to cDNA microarray analysis P Hegde, R Qi, K Abernathy, C Gay, S Dharap, R Gaspard, JE Hughes, ... Biotechniques 29 (3), 548-562, 2000	1391	2000
A gene map of the human genome GD Schuler, MS Boguski, EA Stewart, LD Stein, G Gyapay, K Rice, ... Science 274 (5287), 540-546, 1996	1384	1996
Multiple-laboratory comparison of microarray platforms RA Irizarry, D Warren, F Spencer, IF Kim, S Biswal, BC Frank, ... Nature methods 2 (5), 345-350, 2005	1076	2005

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