| Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica DW Udwary, L Zeigler, RN Asolkar, V Singan, A Lapidus, W Fenical, ... Proceedings of the National Academy of Sciences 104 (25), 10376-10381, 2007 | 678 | 2007 |
| Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019 | 569 | 2019 |
| Species-Specific Secondary Metabolite Production in Marine Actinomycetes of the Genus Salinispora PR Jensen, PG Williams, DC Oh, L Zeigler, W Fenical Applied and environmental microbiology 73 (4), 1146-1152, 2007 | 443 | 2007 |
| Genomic and functional adaptation in surface ocean planktonic prokaryotes S Yooseph, KH Nealson, DB Rusch, JP McCrow, CL Dupont, M Kim, ... Nature 468 (7320), 60-66, 2010 | 323 | 2010 |
| Functional tradeoffs underpin salinity-driven divergence in microbial community composition CL Dupont, J Larsson, S Yooseph, K Ininbergs, J Goll, ... PloS one 9 (2), e89549, 2014 | 215 | 2014 |
| Expansion of the global RNA virome reveals diverse clades of bacteriophages U Neri, YI Wolf, S Roux, AP Camargo, B Lee, D Kazlauskas, IM Chen, ... Cell 185 (21), 4023-4037. e18, 2022 | 178 | 2022 |
| Single virus genomics: a new tool for virus discovery LZ Allen, T Ishoey, MA Novotny, JS McLean, RS Lasken, SJ Williamson PloS one 6 (3), e17722, 2011 | 171 | 2011 |
| Contrasting genomic properties of free-living and particle-attached microbial assemblages within a coastal ecosystem MW Smith, L Zeigler Allen, AE Allen, L Herfort, HM Simon Frontiers in microbiology 4, 120, 2013 | 159 | 2013 |
| A metagenomic framework for the study of airborne microbial communities S Yooseph, C Andrews-Pfannkoch, A Tenney, J McQuaid, S Williamson, ... PLoS One 8 (12), e81862, 2013 | 149 | 2013 |
| Metagenomic exploration of viruses throughout the Indian Ocean SJ Williamson, LZ Allen, HA Lorenzi, DW Fadrosh, D Brami, ... Public Library of Science 7 (10), e42047, 2012 | 134 | 2012 |
| Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic LZ Allen, EE Allen, JH Badger, JP McCrow, IT Paulsen, LDH Elbourne, ... The ISME journal 6 (7), 1403-1414, 2012 | 118 | 2012 |
| Going deeper: metagenome of a hadopelagic microbial community EA Eloe, DW Fadrosh, M Novotny, L Zeigler Allen, M Kim, MJ Lombardo, ... PLoS one 6 (5), e20388, 2011 | 107 | 2011 |
| The Baltic Sea virome: diversity and transcriptional activity of DNA and RNA viruses L Zeigler Allen, JP McCrow, K Ininbergs, CL Dupont, JH Badger, ... MSystems 2 (1), 10.1128/msystems. 00125-16, 2017 | 85 | 2017 |
| Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques JS McLean, SJ Fansler, PD Majors, K McAteer, LZ Allen, ME Shirtliff, ... PloS one 7 (3), e32219, 2012 | 76 | 2012 |
| Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection BC Kolody, JP McCrow, LZ Allen, FO Aylward, KM Fontanez, A Moustafa, ... The ISME journal 13 (11), 2817-2833, 2019 | 75 | 2019 |
| Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform JS McLean, MJ Lombardo, MG Ziegler, M Novotny, J Yee-Greenbaum, ... Genome research 23 (5), 867-877, 2013 | 75 | 2013 |
| Metagenomic investigation of microbes and viruses in patients with jaw osteonecrosis associated with bisphosphonate therapy PP Sedghizadeh, S Yooseph, DW Fadrosh, L Zeigler-Allen, ... Oral surgery, oral medicine, oral pathology and oral radiology 114 (6), 764-770, 2012 | 56 | 2012 |
| Diffuse flow environments within basalt-and sediment-based hydrothermal vent ecosystems harbor specialized microbial communities BJ Campbell, SW Polson, L Zeigler Allen, SJ Williamson, CK Lee, ... Frontiers in microbiology 4, 182, 2013 | 50 | 2013 |
| Assessing viral taxonomic composition in benthic marine ecosystems: reliability and efficiency of different bioinformatic tools for viral metagenomic analyses M Tangherlini, A Dell’Anno, L Zeigler Allen, G Riccioni, C Corinaldesi Scientific Reports 6 (1), 28428, 2016 | 37 | 2016 |
| Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region CC James, AD Barton, LZ Allen, RH Lampe, A Rabines, A Schulberg, ... Nature communications 13 (1), 2448, 2022 | 35 | 2022 |
