Pedro Mendes

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Douglas KellUniversity of LiverpoolCorreu electrònic verificat a liv.ac.uk
Kieran SmallboneMCISB / Mathematics / Computer Science, University of ManchesterCorreu electrònic verificat a manchester.ac.uk
Lloyd W. SumnerUniversity of Missouri, Biochemistry Dept, Bond Life Sciences Center, MU Metabolomics, IPGCorreu electrònic verificat a missouri.edu
Stefan HoopsResearch Associate Professor, Biocomplexity Institute & Initiative, University of VirginiaCorreu electrònic verificat a virginia.edu
Neil SwainstonEpoch BiodesignCorreu electrònic verificat a epochbiodesign.com
Jürgen PahleIndependent Group Leader, Heidelberg University, GermanyCorreu electrònic verificat a bioquant.uni-heidelberg.de
Alberto de la FuenteQatar Biomedical Research InstituteCorreu electrònic verificat a hbku.edu.qa
Sven SahleUniversität HeidelbergCorreu electrònic verificat a bioquant.uni-heidelberg.de
Richard DixonDistinguished Professor of Biology Emeritus, University of North TexasCorreu electrònic verificat a unt.edu
Hans WesterhoffUniversity of Amsterdam, VU University Amsterdam, University of ManchesterCorreu electrònic verificat a manchester.ac.uk
Julio R. Banga ( ORCID 0000-0002-42...Research Professor, MBG-CSIC, Pontevedra (Spain)Correu electrònic verificat a csic.es
Joseph Olufemi DadaAfe Babalola University, Ado-EkitiCorreu electrònic verificat a abuad.edu.ng
Oliver FiehnUC DavisCorreu electrònic verificat a ucdavis.edu
Snoep JLStellenbosch University; Manchester University; Vrije Universiteit AmsterdamCorreu electrònic verificat a sun.ac.za
Warwick DunnDepartment of Biochemistry and Systems Biology, ISMIB, University of LiverpoolCorreu electrònic verificat a liverpool.ac.uk
Vladimir ShulaevProfessor, University of North TexasCorreu electrònic verificat a unt.edu
Argelia LorenceJames and Wanda Lee Vaughn Endowed Professor, Arkansas State UniversityCorreu electrònic verificat a astate.edu
Paul DobsonScruffy Biotech LtdCorreu electrònic verificat a manchester.ac.uk
Norman W. PatonProfessor of Computer Science, University of ManchesterCorreu electrònic verificat a manchester.ac.uk
Vangelis SimeonidisSenior Project Manager, PATHCorreu electrònic verificat a path.org

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Pedro Mendes

University of Connecticut

Correu electrònic verificat a uchc.edu - Pàgina d'inici

systems biology bioinformatics computational biology modeling simulation


Títol Ordena per cites Ordena per any Ordena per títol	Citada per Citada per	Any
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models M Hucka, A Finney, HM Sauro, H Bolouri, JC Doyle, H Kitano, AP Arkin, ... Bioinformatics 19 (4), 524-531, 2003	3862	2003
COPASI—a complex pathway simulator S Hoops, S Sahle, R Gauges, C Lee, J Pahle, N Simus, M Singhal, L Xu, ... Bioinformatics 22 (24), 3067-3074, 2006	3108	2006
Plant metabolomics: large-scale phytochemistry in the functional genomics era LW Sumner, P Mendes, RA Dixon Phytochemistry 62 (6), 817-836, 2003	1475	2003
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	1229	2013
Parameter estimation in biochemical pathways: a comparison of global optimization methods CG Moles, P Mendes, JR Banga Genome research 13 (11), 2467-2474, 2003	1147	2003
ChEBI in 2016: Improved services and an expanding collection of metabolites J Hastings, G Owen, A Dekker, M Ennis, N Kale, V Muthukrishnan, ... Nucleic acids research 44 (D1), D1214-D1219, 2016	1055	2016
Potential of metabolomics as a functional genomics tool RJ Bino, RD Hall, O Fiehn, J Kopka, K Saito, J Draper, BJ Nikolau, ... Trends in plant science 9 (9), 418-425, 2004	927	2004
GEPASI: a software package for modelling the dynamics, steady states and control of biochemical and other systems P Mendes Bioinformatics 9 (5), 563-571, 1993	915	1993
Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation. P Mendes, D Kell Bioinformatics (Oxford, England) 14 (10), 869-883, 1998	903	1998
Biochemistry by numbers: simulation of biochemical pathways with Gepasi 3 P Mendes Trends in biochemical sciences 22 (9), 361-363, 1997	771	1997
Minimum information requested in the annotation of biochemical models (MIRIAM) NL Novère, A Finney, M Hucka, US Bhalla, F Campagne, J Collado-Vides, ... Nature biotechnology 23 (12), 1509-1515, 2005	719	2005
Discovery of meaningful associations in genomic data using partial correlation coefficients A De La Fuente, N Bing, I Hoeschele, P Mendes Bioinformatics 20 (18), 3565-3574, 2004	704	2004
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology MJ Herrgård, N Swainston, P Dobson, WB Dunn, KY Arga, M Arvas, ... Nature biotechnology 26 (10), 1155-1160, 2008	698	2008
The metabolomics standards initiative (MSI) O Fiehn, D Robertson, J Griffin, M van der Werf, B Nikolau, N Morrison, ... Metabolomics 3, 175-178, 2007	552	2007
myo-Inositol Oxygenase Offers a Possible Entry Point into Plant Ascorbate Biosynthesis A Lorence, BI Chevone, P Mendes, CL Nessler Plant Physiology 134 (3), 1200-1205, 2004	538	2004
Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism CD Broeckling, DV Huhman, MA Farag, JT Smith, GD May, P Mendes, ... Journal of experimental botany 56 (410), 323-336, 2005	461	2005
A hybrid approach for efficient and robust parameter estimation in biochemical pathways M Rodriguez-Fernandez, P Mendes, JR Banga Biosystems 83 (2-3), 248-265, 2006	406	2006
Gene networks: how to put the function in genomics P Brazhnik, A De La Fuente, P Mendes TRENDS in Biotechnology 20 (11), 467-472, 2002	392	2002
The metabolomics standards initiative Nature biotechnology 25 (8), 846-848, 2007	350	2007
Recon 2.2: from reconstruction to model of human metabolism N Swainston, K Smallbone, H Hefzi, PD Dobson, J Brewer, M Hanscho, ... Metabolomics 12, 1-7, 2016	337	2016

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