Zhi John Lu

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Yucheng T. YangAssociate Professor, Fudan UniversityCorreu electrònic verificat a fudan.edu.cn
Mark GersteinProfessor of Biomedical Informatics, Yale UniversityCorreu electrònic verificat a yale.edu
David H. MathewsDepartment of Biochemistry and Biophysics, University of Rochester Medical CenterCorreu electrònic verificat a urmc.rochester.edu
Jiapei YuanAssistent Professor, Chinese Academy of Medical Sciences & Peking Union Medical CollegeCorreu electrònic verificat a ihcams.ac.cn
Yang E. LiAssistant Professor, Washington University in St. LouisCorreu electrònic verificat a wustl.edu
CHAO DIUniversity of PennsylvaniaCorreu electrònic verificat a pennmedicine.upenn.edu
Michael Q. Zhangprofessor of university of texas at DallasCorreu electrònic verificat a utdallas.edu
Chao ChengBaylor College of MedicineCorreu electrònic verificat a bcm.edu
Kevin Y YipSanford Burnham Prebys Medical Discovery InstituteCorreu electrònic verificat a sbpdiscovery.org
Yang Wu | 吴杨Associate investigator, Institute of Computing Technology, C.A.S. ChinaCorreu electrònic verificat a ict.ac.cn
Xihao HuGV20 TherapeuticsCorreu electrònic verificat a gv20therapeutics.com
Raymond K. AuerbachData ScientistCorreu electrònic verificat a aya.yale.edu
Joel RozowskyResearch Scientist, Yale UniversityCorreu electrònic verificat a yale.edu
XU TANTsinghua UniversityCorreu electrònic verificat a rics.bwh.harvard.edu
Yong KongAssociate Director, Bioinformatics, Keck Foundation Biotechnology Laboratory, Yale UniversityCorreu electrònic verificat a yale.edu
Ekta KhuranaWeill Cornell Medical College, Yale University, University of Pennsylvania, Indian Institute ofCorreu electrònic verificat a med.cornell.edu
Ewan BirneyDirector, EMBL-EBICorreu electrònic verificat a ebi.ac.uk
Yifang Liu

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Zhi John Lu

Associate Professor, Tsinghua University

Correu electrònic verificat a tsinghua.edu.cn - Pàgina d'inici

Bioinformatics Noncoding RNA


Títol Ordena per cites Ordena per any Ordena per títol	Citada per Citada per	Any
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature, 2012	17539	2012
A user’s guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS Biol 9 (4), e1001046, 2011	1498	2011
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ... Science 330 (6012), 1775-1787, 2010	1160	2010
Divergent lncRNAs regulate gene expression and lineage differentiation in pluripotent cells S Luo, JY Lu, L Liu, Y Yin, C Chen, X Han, B Wu, R Xu, W Liu, P Yan, ... Cell stem cell 18 (5), 637-652, 2016	407	2016
Comparative analysis of the transcriptome across distant species MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ... Nature 512 (7515), 445-448, 2014	339	2014
Characterization of Stress‐responsive lncRNAs in Arabidopsis thaliana by Integrating Expression, Epigenetic and Structural Features C Di, J Yuan, Y Wu, J Li, H Lin, L Hu, T Zhang, Y Qi, MB Gerstein, Y Guo, ... The Plant Journal, 2014	321	2014
Recurrently deregulated lncRNAs in hepatocellular carcinoma Y Yang, L Chen, J Gu, H Zhang, J Yuan, Q Lian, G Lv, S Wang, Y Wu, ... Nature communications 8 (1), 14421, 2017	310	2017
Pervasive chromatin-RNA binding protein interactions enable RNA-based regulation of transcription R Xiao, JY Chen, Z Liang, D Luo, G Chen, ZJ Lu, Y Chen, B Zhou, H Li, ... Cell 178 (1), 107-121. e18, 2019	296	2019
Improved RNA secondary structure prediction by maximizing expected pair accuracy ZJ Lu, JW Gloor, DH Mathews Rna 15 (10), 1805-1813, 2009	270	2009
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans W Niu, ZJ Lu, M Zhong, M Sarov, JI Murray, CM Brdlik, J Janette, C Chen, ... Genome research 21 (2), 245-254, 2011	268	2011
CLIPdb: a CLIP-seq database for protein-RNA interactions YCT Yang, C Di, B Hu, M Zhou, Y Liu, N Song, Y Li, J Umetsu, ZJ Lu BMC genomics 16, 1-8, 2015	245	2015
Genome-Wide Identification of Binding Sites Defines Distinct Functions for Caenorhabditis elegans PHA-4/FOXA in Development and Environmental Response M Zhong, W Niu, ZJ Lu, M Sarov, JI Murray, J Janette, D Raha, ... PLoS genetics 6 (2), e1000848, 2010	220	2010
Microarray is an efficient tool for circRNA profiling S Li, S Teng, J Xu, G Su, Y Zhang, J Zhao, S Zhang, H Wang, W Qin, ... Briefings in bioinformatics 20 (4), 1420-1433, 2019	194	2019
Efficient siRNA selection using hybridization thermodynamics ZJ Lu, DH Mathews Nucleic acids research 36 (2), 640-647, 2008	180	2008
RNA biomarkers: frontier of precision medicine for cancer X Xi, T Li, Y Huang, J Sun, Y Zhu, Y Yang, ZJ Lu Non-coding RNA 3 (1), 9, 2017	169	2017
Critical roles of long noncoding RNAs in Drosophila spermatogenesis K Wen, L Yang, T Xiong, C Di, D Ma, M Wu, Z Xue, X Zhang, L Li, ... Genome Research 26 (9), 1233-1244, 2016	167	2016
A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation ZJ Lu, DH Turner, DH Mathews Nucleic acids research 34 (17), 4912-4924, 2006	157	2006
POSTAR2: deciphering the post-transcriptional regulatory logics Y Zhu, G Xu, YT Yang, Z Xu, X Chen, B Shi, D Xie, ZJ Lu, P Wang Nucleic acids research 47 (D1), D203-D211, 2019	156	2019
Systematic identification of synergistic drug pairs targeting HIV X Tan, L Hu, LJ Luquette III, G Gao, Y Liu, H Qu, R Xi, ZJ Lu, PJ Park, ... Nature Biotechnology, 2012	152	2012
COME: a robust coding potential calculation tool for lncRNA identification and characterization based on multiple features L Hu, Z Xu, B Hu, ZJ Lu Nucleic acids research 45 (1), e2-e2, 2017	127	2017

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