Manuel N. Melo

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Siewert J. MarrinkProfessor of Molecular Dynamics, University of GroningenE-mailová adresa ověřena na: rug.nl
Miguel A. R. B. CastanhoBiochemistry, School of Medicine and Institute of Molecular Medicine, University of Lisbon, PortugalE-mailová adresa ověřena na: medicina.ulisboa.pt
Helgi I. IngólfssonLawrence Livermore National LaboratoryE-mailová adresa ověřena na: llnl.gov
D. Peter TielemanCanada Research Chair in Molecular Simulation, University of CalgaryE-mailová adresa ověřena na: ucalgary.ca
Nuno C. SantosInstituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaE-mailová adresa ověřena na: fm.ul.pt
Floris J. van EerdeniFReC, Osaka UniversityE-mailová adresa ověřena na: ifrec.osaka-u.ac.jp
Matej PraprotnikLaboratory for Molecular Modeling, National Institute of Chemistry, Ljubljana, SloveniaE-mailová adresa ověřena na: cmm.ki.si
Sónia Troeira HenriquesQueensland University of Technology (QUT), Translational Research Institute (TRI)E-mailová adresa ověřena na: qut.edu.au
César A LópezResearch associate-Los alamos national laboratoryE-mailová adresa ověřena na: lanl.gov
Marcelo Fabricio Masmansenior researcher, University of AmsterdamE-mailová adresa ověřena na: uva.nl
Miguel X. FernandesUniversity of MadeiraE-mailová adresa ověřena na: uma.pt
ANDREU DUniversitat Pompeu Fabra (UPF)E-mailová adresa ověřena na: upf.edu
N. GogaE-mailová adresa ověřena na: rug.nl
Valerie UytterhoevenStaff ScientistE-mailová adresa ověřena na: kuleuven.vib.be
Patrik VerstrekenVIB Center for Brain & Disease Research & KU Leuven, Department of NeurosciencesE-mailová adresa ověřena na: kuleuven.vib.be
Fabio Ceneviva Lacerda de AlmeidaProfessor of Biochemistry, Federal University of Rio de JaneiroE-mailová adresa ověřena na: bioqmed.ufrj.br
Ana Paula ValenteFull Professor of Structural Biology, Federal University of Rio de JaneiroE-mailová adresa ověřena na: bioqmed.ufrj.br
Xavier Periolehome
Joao Miguel Freire

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Manuel N. Melo

ITQB NOVA

E-mailová adresa ověřena na: itqb.unl.pt - Domovská stránka

Molecular Dynamics Coarse Grain Antimicrobial Peptides Membrane Biophysics


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
MDAnalysis: a Python package for the rapid analysis of molecular dynamics simulations RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ... Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2019	1532	2019
Lipid organization of the plasma membrane HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ... Journal of the american chemical society 136 (41), 14554-14559, 2014	973	2014
Antimicrobial peptides: linking partition, activity and high membrane-bound concentrations MN Melo, R Ferre, MARB Castanho Nature Reviews Microbiology 7 (3), 245-250, 2009	834	2009
Cell-penetrating peptides and antimicrobial peptides: how different are they? ST Henriques, MN Melo, MARB Castanho Biochemical journal 399 (1), 1-7, 2006	527	2006
Dry Martini, a coarse-grained force field for lipid membrane simulations with implicit solvent C Arnarez, JJ Uusitalo, MF Masman, HI Ingólfsson, DH De Jong, MN Melo, ... Journal of chemical theory and computation 11 (1), 260-275, 2015	318	2015
Lipid–protein interactions are unique fingerprints for membrane proteins V Corradi, E Mendez-Villuendas, HI Ingólfsson, RX Gu, I Siuda, MN Melo, ... ACS central science 4 (6), 709-717, 2018	317	2018
Escherichia coli cell surface perturbation and disruption induced by antimicrobial peptides BP100 and pepR CS Alves, MN Melo, HG Franquelim, R Ferre, M Planas, L Feliu, E Bardají, ... Journal of Biological Chemistry 285 (36), 27536-27544, 2010	275	2010
Pitfalls of the Martini model R Alessandri, PCT Souza, S Thallmair, MN Melo, AH De Vries, SJ Marrink Journal of chemical theory and computation 15 (10), 5448-5460, 2019	210	2019
Ceramides bind VDAC2 to trigger mitochondrial apoptosis S Dadsena, S Bockelmann, JGM Mina, DG Hassan, S Korneev, ... Nature communications 10 (1), 1832, 2019	193	2019
Hsc70-4 deforms membranes to promote synaptic protein turnover by endosomal microautophagy V Uytterhoeven, E Lauwers, I Maes, K Miskiewicz, MN Melo, J Swerts, ... Neuron 88 (4), 735-748, 2015	184	2015
Two decades of Martini: Better beads, broader scope SJ Marrink, L Monticelli, MN Melo, R Alessandri, DP Tieleman, ... Wiley Interdisciplinary Reviews: Computational Molecular Science 13 (1), e1620, 2023	162	2023
Parameters for Martini sterols and hopanoids based on a virtual-site description MN Melo, HI Ingólfsson, SJ Marrink The Journal of chemical physics 143 (24), 2015	159	2015
Using zeta-potential measurements to quantify peptide partition to lipid membranes JM Freire, MM Domingues, J Matos, MN Melo, AS Veiga, NC Santos, ... European biophysics journal 40, 481-487, 2011	121	2011
Synergistic effects of the membrane actions of cecropin-melittin antimicrobial hybrid peptide BP100 R Ferre, MN Melo, AD Correia, L Feliu, E Bardají, M Planas, M Castanho Biophysical journal 96 (5), 1815-1827, 2009	121	2009
Omiganan pentahydrochloride in the front line of clinical applications of antimicrobial peptides MN Melo, D Dugourd, MARB Castanho Recent patents on anti-infective drug discovery 1 (2), 201-207, 2006	112	2006
Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex FJ Van Eerden, MN Melo, PWJM Frederix, X Periole, SJ Marrink Nature communications 8 (1), 15214, 2017	100	2017
Adaptive resolution simulation of an atomistic protein in MARTINI water J Zavadlav, MN Melo, SJ Marrink, M Praprotnik The Journal of chemical physics 140 (5), 2014	100	2014
Omiganan interaction with bacterial membranes and cell wall models. Assigning a biological role to saturation MN Melo, MARB Castanho Biochimica et Biophysica Acta (BBA)-Biomembranes 1768 (5), 1277-1290, 2007	80	2007
Adaptive resolution simulation of MARTINI solvents J Zavadlav, MN Melo, AV Cunha, AH De Vries, SJ Marrink, M Praprotnik Journal of Chemical Theory and Computation 10 (6), 2591-2598, 2014	65	2014
Interaction of the Dengue virus fusion peptide with membranes assessed by NMR: The essential role of the envelope protein Trp101 for membrane fusion MN Melo, FJR Sousa, FA Carneiro, MARB Castanho, AP Valente, ... Journal of Molecular Biology 392 (3), 736-746, 2009	65	2009

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