| Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts JW Guarnieri, JM Dybas, H Fazelinia, MS Kim, J Frere, Y Zhang, ... Science translational medicine 15 (708), eabq1533, 2023 | 105 | 2023 |
| The HSV-1 ubiquitin ligase ICP0: Modifying the cellular proteome to promote infection MC Rodríguez, JM Dybas, J Hughes, MD Weitzman, C Boutell Virus research 285, 198015, 2020 | 85 | 2020 |
| Role of miR-2392 in driving SARS-CoV-2 infection JT McDonald, FJ Enguita, D Taylor, RJ Griffin, W Priebe, MR Emmett, ... Cell reports 37 (3), 2021 | 80 | 2021 |
| Structural characteristics of novel protein folds N Fernandez-Fuentes, JM Dybas, A Fiser PLoS computational biology 6 (4), e1000750, 2010 | 77 | 2010 |
| Comparative proteomics identifies Schlafen 5 (SLFN5) as a herpes simplex virus restriction factor that suppresses viral transcription ET Kim, JM Dybas, K Kulej, ED Reyes, AM Price, LN Akhtar, A Orr, ... Nature microbiology 6 (2), 234-245, 2021 | 43 | 2021 |
| Ndfip1 restricts mTORC1 signalling and glycolysis in regulatory T cells to prevent autoinflammatory disease AAK Layman, G Deng, CE O’Leary, S Tadros, RM Thomas, JM Dybas, ... Nature Communications 8 (1), 15677, 2017 | 43 | 2017 |
| Computational analysis and experimental validation of gene predictions in Toxoplasma gondii JM Dybas, CJ Madrid-Aliste, FY Che, E Nieves, D Rykunov, RH Angeletti, ... PLoS One 3 (12), e3899, 2008 | 41 | 2008 |
| Targeted down regulation of core mitochondrial genes during SARS-CoV-2 infection JW Guarnieri, JM Dybas, H Fazelinia, MS Kim, J Frere, Y Zhang, ... BioRxiv, 2022 | 37 | 2022 |
| Ubiquitination at the interface of tumor viruses and DNA damage responses JM Dybas, C Herrmann, MD Weitzman Current opinion in virology 32, 40-47, 2018 | 30 | 2018 |
| EPIC-DB: a proteomics database for studying Apicomplexan organisms CJ Madrid-Aliste, JM Dybas, RH Angeletti, LM Weiss, K Kim, I Simon, ... BMC genomics 10, 1-7, 2009 | 30 | 2009 |
| Adenovirus-mediated ubiquitination alters protein–RNA binding and aids viral RNA processing C Herrmann, JM Dybas, JC Liddle, AM Price, KE Hayer, R Lauman, ... Nature microbiology 5 (10), 1217-1231, 2020 | 29 | 2020 |
| Integrative proteomics reveals an increase in non-degradative ubiquitylation in activated CD4+ T cells JM Dybas, CE O’Leary, H Ding, LA Spruce, SH Seeholzer, PM Oliver Nature immunology 20 (6), 747-755, 2019 | 28 | 2019 |
| A viral biomolecular condensate coordinates assembly of progeny particles M Charman, N Grams, N Kumar, E Halko, JM Dybas, A Abbott, KK Lum, ... Nature 616 (7956), 332-338, 2023 | 23 | 2023 |
| The E3 ubiquitin ligase Cul4b promotes CD4+ T cell expansion by aiding the repair of damaged DNA AA Dar, K Sawada, JM Dybas, EK Moser, EL Lewis, E Park, H Fazelinia, ... PLoS Biology 19 (2), e3001041, 2021 | 18 | 2021 |
| Modeling proteins using a super-secondary structure library and NMR chemical shift information V Menon, BK Vallat, JM Dybas, A Fiser Structure 21 (6), 891-899, 2013 | 18 | 2013 |
| The E3 ubiquitin ligase Itch restricts antigen-driven B cell responses EK Moser, J Roof, JM Dybas, LA Spruce, SH Seeholzer, MP Cancro, ... Journal of Experimental Medicine 216 (9), 2170-2183, 2019 | 13 | 2019 |
| Adenovirus remodeling of the host proteome and host factors associated with viral genomes JM Dybas, KK Lum, K Kulej, ED Reyes, R Lauman, M Charman, ... Msystems 6 (4), 10.1128/msystems. 00468-21, 2021 | 10 | 2021 |
| Itch attenuates CD4 T‐cell proliferation in mice by limiting WBP2 protein stability NS Field, OA Elbulok, JM Dybas, EK Moser, AA Dar, LA Spruce, ... European journal of immunology 50 (10), 1468-1483, 2020 | 10 | 2020 |
| Adenovirusmediated ubiquitination alters protein-RNA binding and aids viral RNA processing. Nat Microbiol 5: 1217–1231 C Herrmann, JM Dybas, JC Liddle, AM Price, KE Hayer, R Lauman, ... | 10 | 2020 |
| Development of a motif‐based topology‐independent structure comparison method to identify evolutionarily related folds JM Dybas, A Fiser Proteins: Structure, Function, and Bioinformatics 84 (12), 1859-1874, 2016 | 9 | 2016 |
