| TIGRFAMs and genome properties in 2013 DH Haft, JD Selengut, RA Richter, D Harkins, MK Basu, E Beck Nucleic acids research 41 (D1), D387-D395, 2012 | 632 | 2012 |
| Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7 PH Roy, SG Tetu, A Larouche, L Elbourne, S Tremblay, Q Ren, R Dodson, ... PloS one 5 (1), e8842, 2010 | 319 | 2010 |
| Host genetic control of the oral microbiome in health and disease A Gomez, JL Espinoza, DM Harkins, P Leong, R Saffery, M Bockmann, ... Cell host & microbe 22 (3), 269-278. e3, 2017 | 230 | 2017 |
| New insights into dissemination and variation of the health care-associated pathogen Acinetobacter baumannii from genomic analysis MS Wright, DH Haft, DM Harkins, F Perez, KM Hujer, S Bajaksouzian, ... MBio 5 (1), 10.1128/mbio. 00963-13, 2014 | 188 | 2014 |
| Insights into the Environmental Resistance Gene Pool from the Genome Sequence of the Multidrug-Resistant Environmental Isolate Escherichia coli SMS-3-5 WF Fricke, MS Wright, AH Lindell, DM Harkins, C Baker-Austin, J Ravel, ... Journal of bacteriology 190 (20), 6779-6794, 2008 | 136 | 2008 |
| Gastrointestinal microbial populations can distinguish pediatric and adolescent Acute Lymphoblastic Leukemia (ALL) at the time of disease diagnosis SV Rajagopala, S Yooseph, DM Harkins, KJ Moncera, KB Zabokrtsky, ... BMC genomics 17, 1-10, 2016 | 135 | 2016 |
| Stool microbiota composition is associated with the prospective risk of Plasmodium falciparum infection S Yooseph, EF Kirkness, TM Tran, DM Harkins, MB Jones, MG Torralba, ... BMC genomics 16, 1-15, 2015 | 130 | 2015 |
| A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii AP Chan, G Sutton, J DePew, R Krishnakumar, Y Choi, XZ Huang, E Beck, ... Genome biology 16, 1-28, 2015 | 127 | 2015 |
| Advances in microbiome research for animal health RS Peixoto, DM Harkins, KE Nelson Annual Review of Animal Biosciences 9 (1), 289-311, 2021 | 119 | 2021 |
| Whole Genome Analysis of Leptospira licerasiae Provides Insight into Leptospiral Evolution and Pathogenicity JN Ricaldi, DE Fouts, JD Selengut, DM Harkins, KP Patra, A Moreno, ... PLoS neglected tropical diseases 6 (10), e1853, 2012 | 104 | 2012 |
| Draft Genome Sequence of Turicibacter sanguinis PC909, Isolated from Human Feces PO Cuív, ES Klaassens, AS Durkin, DM Harkins, L Foster, J McCorrison, ... Journal of bacteriology 193 (5), 1288-1289, 2011 | 78 | 2011 |
| Supragingival plaque microbiome ecology and functional potential in the context of health and disease JL Espinoza, DM Harkins, M Torralba, A Gomez, SK Highlander, ... MBio 9 (6), 10.1128/mbio. 01631-18, 2018 | 76 | 2018 |
| Pathogenomic Inference of Virulence-Associated Genes in Leptospira interrogans JS Lehmann, DE Fouts, DH Haft, AP Cannella, JN Ricaldi, L Brinkac, ... PLoS neglected tropical diseases 7 (10), e2468, 2013 | 65 | 2013 |
| Application of RT-PCR for indexing avocado sunblotch viroid RJ Schnell, DN Kuhn, CM Ronning, D Harkins Plant Disease 81 (9), 1023-1026, 1997 | 65 | 1997 |
| Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation JR Miller, S Koren, KA Dilley, V Puri, DM Brown, DM Harkins, ... Gigascience 7 (3), gix135, 2018 | 64 | 2018 |
| A draft genome sequence for the Ixodes scapularis cell line, ISE6 JR Miller, S Koren, KA Dilley, DM Harkins, TB Stockwell, RS Shabman, ... F1000Research 7, 297, 2018 | 63 | 2018 |
| Longitudinal study of oral microbiome variation in twins M Freire, A Moustafa, DM Harkins, MG Torralba, Y Zhang, P Leong, ... Scientific reports 10 (1), 7954, 2020 | 53 | 2020 |
| Xylitol and sorbitol effects on the microbiome of saliva and plaque R Rafeek, CVF Carrington, A Gomez, D Harkins, M Torralba, C Kuelbs, ... Journal of oral microbiology 11 (1), 1536181, 2019 | 51 | 2019 |
| Saturation mapping of a major gene for resistance to white pine blister rust in sugar pine DM Harkins, GN Johnson, PA Skaggs, AD Mix, GE Dupper, ME Devey, ... Theoretical and Applied Genetics 97, 1355-1360, 1998 | 38 | 1998 |
| Type 1 diabetes: urinary proteomics and protein network analysis support perturbation of lysosomal function H Singh, Y Yu, MJ Suh, MG Torralba, RD Stenzel, A Tovchigrechko, ... Theranostics 7 (10), 2704, 2017 | 33 | 2017 |
