Sledovat
Ilya Akberdin
Ilya Akberdin
Sirius University, Biosoft.ru, Novosibirsk State University
E-mailová adresa ověřena na: talantiuspeh.ru - Domovská stránka
Název
Citace
Citace
Rok
Methane utilization in Methylomicrobium alcaliphilum 20ZR: a systems approach
IR Akberdin, M Thompson, R Hamilton, N Desai, D Alexander, CA Henard, ...
Scientific reports 8 (1), 2512, 2018
1362018
Fatty Acid Biosynthesis Pathways in Methylomicrobium buryatense 5G(B1)
A Demidenko, IR Akberdin, M Allemann, EE Allen, MG Kalyuzhnaya
Frontiers in microbiology 7, 2167, 2017
762017
BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data
F Kolpakov, I Akberdin, T Kashapov, L Kiselev, S Kolmykov, Y Kondrakhin, ...
Nucleic acids research 47 (W1), W225-W233, 2019
582019
Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR
IR Akberdin, DA Collins, R Hamilton, DY Oshchepkov, AK Shukla, ...
Frontiers in microbiology 9, 2735, 2018
502018
Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts
CA Henard, IR Akberdin, MG Kalyuzhnaya, MT Guarnieri
Green Chemistry 21 (24), 6731-6737, 2019
492019
Metabolic model of central carbon and energy metabolisms of growing Arabidopsis thaliana in relation to sucrose translocation
M Zakhartsev, I Medvedeva, Y Orlov, I Akberdin, O Krebs, WX Schulze
BMC Plant Biology 16, 1-22, 2016
452016
Inheritance of litter size at birth in farmed arctic foxes (Alopex lagopus, Canidae, Carnivora)
TI Axenovich, IV Zorkoltseva, IR Akberdin, SV Beketov, SN Kashtanov, ...
Heredity 98 (2), 99-105, 2007
372007
MAMMOTh: A new database for curated mathematical models of biomolecular systems
F Kazantsev, I Akberdin, S Lashin, N Ree, V Timonov, A Ratushny, ...
Journal of bioinformatics and computational biology 16 (01), 1740010, 2018
292018
Pluripotency gene network dynamics: System views from parametric analysis
IR Akberdin, NA Omelyanchuk, SI Fadeev, NE Leskova, EA Oschepkova, ...
PLoS One 13 (3), e0194464, 2018
272018
Physiologically based pharmacokinetic modeling of nanoparticle biodistribution: a review of existing models, simulation software, and data analysis tools
EO Kutumova, IR Akberdin, IN Kiselev, RN Sharipov, VS Egorova, ...
International Journal of Molecular Sciences 23 (20), 12560, 2022
202022
BioUML—Towards a universal research platform
F Kolpakov, I Akberdin, I Kiselev, S Kolmykov, Y Kondrakhin, M Kulyashov, ...
Nucleic Acids Research 50 (W1), W124-W131, 2022
202022
A Modular Mathematical Model of Exercise-Induced Changes in Metabolism, Signaling, and Gene Expression in Human Skeletal Muscle
IR Akberdin, IN Kiselev, SS Pintus, RN Sharipov, AY Vertyshev, ...
International Journal of Molecular Sciences 22 (19), 10353, 2021
192021
A new stochastic model for subgenomic hepatitis C virus replication considers drug resistant mutants
NV Ivanisenko, EL Mishchenko, IR Akberdin, PS Demenkov, ...
PloS one 9 (3), e91502, 2014
182014
In Silico Cell: Challenges and Perspectives
IR Akberdin, FV Kazantsev, TV Ermak, VS Timonov, TM Khlebodarova, ...
Matematicheskaya biologiya i bioinformatika 8 (1), 295-315, 2013
172013
A delay differential equation approach to model the COVID-19 pandemic
IN Kiselev, IR Akberdin, FA Kolpakov
medRxiv, 2021.09. 01.21263002, 2021
142021
A Genome-Scale Metabolic Model of 2,3-Butanediol Production by Thermophilic Bacteria Geobacillus icigianus
M Kulyashov, SE Peltek, IR Akberdin
Microorganisms 8 (7), 1002, 2020
142020
A Modular Visual Model of Energy Metabolism in Human Skeletal Muscle
IN Kiselev, IR Akberdin, AY Vertyshev, DV Popov, FA Kolpakov
Mathematical Biology & Bioinformatics 14 (2), 373-392, 2019
112019
Pyrophosphate-dependent enzymes in methanotrophs: new findings and views
VN Khmelenina, ON Rozova, IR Akberdin, MG Kalyuzhnaya, ...
Methane biocatalysis: paving the way to sustainability, 83-98, 2018
112018
MGSmodeller–a computer system for reconstruction, calculation and analysis mathematical models of molecular genetic system
FV Kazantsev, IR Akberdin, KD Bezmaternykh, SA Lashin, ...
THE SIXTH INTERNATIONAL CONFERENCE ON BIOINFORMATICS OF GENOME REGULATION …, 2008
102008
A cellular automaton to model the development of primary shoot meristems of Arabidopsis thaliana
IR Akberdin, EA Ozonov, VV Mironova, NA Omelyanchuk, VA Likhoshvai, ...
Journal of Bioinformatics and Computational Biology 5 (02b), 641-650, 2007
102007
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Články 1–20