| Machine learning enables interpretable discovery of innovative polymers for gas separation membranes J Yang, L Tao, J He, JR McCutcheon, Y Li Science Advances 8 (29), eabn9545, 2022 | 144 | 2022 |
| Designing polymeric membranes with coordination chemistry for high-precision ion separations RM DuChanois, M Heiranian, J Yang, CJ Porter, Q Li, X Zhang, ... Science Advances 8 (9), eabm9436, 2022 | 94 | 2022 |
| Opportunities and challenges for machine learning-assisted enzyme engineering J Yang, FZ Li, FH Arnold ACS Central Science 10 (2), 226-241, 2024 | 61 | 2024 |
| Efficient separation of small organic contaminants in water using functionalized nanoporous graphene membranes: Insights from molecular dynamics simulations J Yang, Z Shen, J He, Y Li Journal of Membrane Science 630, 119331, 2021 | 39 | 2021 |
| Molecular insights into the structure-property relationships of 3D printed polyamide reverse-osmosis membrane for desalination J He, J Yang, JR McCutcheon, Y Li Journal of Membrane Science 658, 120731, 2022 | 32 | 2022 |
| DeCOIL: Optimization of Degenerate Codon Libraries for Machine Learning-Assisted Protein Engineering J Yang, J Ducharme, KE Johnston, FZ Li, Y Yue, FH Arnold ACS Synthetic Biology 12 (8), 2444–2454, 2023 | 14 | 2023 |
| A combinatorially complete epistatic fitness landscape in an enzyme active site KE Johnston, PJ Almhjell, EJ Watkins-Dulaney, G Liu, NJ Porter, J Yang, ... Proceedings of the National Academy of Sciences 121 (32), e2400439121, 2024 | 11 | 2024 |
| Shape-dependent interactions of manganese oxide nanomaterials with lipid bilayer vesicles I Zucker, SM Hashmi, J Yang, Y He, LD Pfefferle, M Elimelech Langmuir 35 (43), 13958-13966, 2019 | 10 | 2019 |
| Active learning-assisted directed evolution J Yang, RG Lal, JC Bowden, R Astudillo, MA Hameedi, S Kaur, M Hill, ... Nature Communications 16 (1), 714, 2025 | 6 | 2025 |
| CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes J Yang, A Mora, S Liu, BJ Wittmann, A Anandkumar, FH Arnold, Y Yue Advances in Neural Information Processing Systems Datasets & Benchmarks Track, 2024 | 5 | 2024 |
| Conditional enzyme generation using protein language models with adapters J Yang, A Bhatnagar, JA Ruffolo, A Madani arXiv preprint arXiv:2410.03634, 2024 | 2 | 2024 |
| Evaluation of machine learning-assisted directed evolution across diverse combinatorial landscapes FZ Li, J Yang, K Johnston, E Gursoy, Y Yue, F Arnold bioRxiv, 2024.10. 24.619774, 2024 | 1 | 2024 |
