Joshua Welch

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	Všechny	Od 2020
Citace	6095	5441
h-index	27	25
i10-index	43	38

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Jan F. PrinsProfessor of Computer Science, UNC Chapel HillE-mailová adresa ověřena na: cs.unc.edu
Evan MacoskoBroad Institute of MIT and HarvardE-mailová adresa ověřena na: broadinstitute.org
Carly MartinMIT BiologyE-mailová adresa ověřena na: mit.edu
Charles R VanderburgBroad Institute of MIT and HarvardE-mailová adresa ověřena na: broadinstitute.org
Noriaki OnoUniversity of Texas Health Science Center at HoustonE-mailová adresa ověřena na: uth.tmc.edu
Wanida Techawattanawisal OnoUniversity of Texas Health Science Center at Houston School of DentistryE-mailová adresa ověřena na: uth.tmc.edu
Velina KozarevaGraduate Student, MITE-mailová adresa ověřena na: mit.edu
Jialin LiuPhd Candidate, University of MichiganE-mailová adresa ověřena na: umich.edu
Robert R Mohajeri-StickelsStanford UniversityE-mailová adresa ověřena na: stanford.edu
Samuel G. RodriquesDirector and CEO, FutureHouse Inc.; Group Leader, Francis Crick InstituteE-mailová adresa ověřena na: crick.ac.uk
Aleksandrina GoevaUniversity of TorontoE-mailová adresa ověřena na: broadinstitute.org
Fei ChenCore Faculty Member, Broad Institute of MIT and Harvard, SCRB, Harvard UniversityE-mailová adresa ověřena na: broadinstitute.org
Hong Ma2nd Affiliated Hospital, School of Medicine Zhejiang UniversityE-mailová adresa ověřena na: zju.edu.cn
Jiandong LiuUniversity of North Caronila, Chapel HillE-mailová adresa ověřena na: med.unc.edu
Ziqing Liu (刘子青）Assistant Professor of Physiology, Medical College of WisconsinE-mailová adresa ověřena na: mcw.edu
Chao GaoPhD candidate, University of MichiganE-mailová adresa ověřena na: umich.edu
Alexander J. HarteminkProfessor of Computer Science, Duke UniversityE-mailová adresa ověřena na: cs.duke.edu
Yang ZhouAssistant Professor of Biomedical Engineering, University of Alabama at BirminghamE-mailová adresa ověřena na: uab.edu
Li WangResearch Associate in UNC-Chapel HillE-mailová adresa ověřena na: email.unc.edu
Weining ShenAssociate Professor of Statistics, University of California, IrvineE-mailová adresa ověřena na: uci.edu

Sledovat

Joshua Welch

Associate Professor, University of Michigan

E-mailová adresa ověřena na: umich.edu - Domovská stránka

Computational Biology


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution SG Rodriques, RR Stickels, A Goeva, CA Martin, E Murray, ... Science 363 (6434), 1463-1467, 2019	1982	2019
Single-cell multi-omic integration compares and contrasts features of brain cell identity JD Welch, V Kozareva, A Ferreira, C Vanderburg, C Martin, EZ Macosko Cell 177 (7), 1873-1887. e17, 2019	1102	2019
A multimodal cell census and atlas of the mammalian primary motor cortex Principal manuscript editors, Analysis coordination, ... Nature 598 (7879), 86-102, 2021	345	2021
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ... Nature 598 (7879), 103-110, 2021	265	2021
A Wnt-mediated transformation of the bone marrow stromal cell identity orchestrates skeletal regeneration Y Matsushita, M Nagata, KM Kozloff, JD Welch, K Mizuhashi, ... Nature communications 11 (1), 332, 2020	238	2020
Single-cell transcriptomics reconstructs fate conversion from fibroblast to cardiomyocyte Z Liu, L Wang, JD Welch, H Ma, Y Zhou, HR Vaseghi, S Yu, JB Wall, ... Nature 551 (7678), 100-104, 2017	230	2017
SLICER: inferring branched, nonlinear cellular trajectories from single cell RNA-seq data JD Welch, AJ Hartemink, JF Prins Genome biology 17, 1-15, 2016	193	2016
MATCHER: manifold alignment reveals correspondence between single cell transcriptome and epigenome dynamics JD Welch, AJ Hartemink, JF Prins Genome biology 18, 1-19, 2017	162	2017
Jointly defining cell types from multiple single-cell datasets using LIGER J Liu, C Gao, J Sodicoff, V Kozareva, EZ Macosko, JD Welch Nature protocols 15 (11), 3632-3662, 2020	145	2020
Single-cell transcriptomic analyses of cell fate transitions during human cardiac reprogramming Y Zhou, Z Liu, JD Welch, X Gao, L Wang, T Garbutt, B Keepers, H Ma, ... Cell stem cell 25 (1), 149-164. e9, 2019	120	2019
Multi-omic single-cell velocity models epigenome–transcriptome interactions and improves cell fate prediction C Li, MC Virgilio, KL Collins, JD Welch Nature biotechnology 41 (3), 387-398, 2023	83	2023
Iterative single-cell multi-omic integration using online learning C Gao, J Liu, AR Kriebel, S Preissl, C Luo, R Castanon, J Sandoval, ... Nature biotechnology 39 (8), 1000-1007, 2021	77	2021
A subset of replication-dependent histone mRNAs are expressed as polyadenylated RNAs in terminally differentiated tissues SM Lyons, CH Cunningham, JD Welch, B Groh, AY Guo, B Wei, ... Nucleic acids research 44 (19), 9190-9205, 2016	74	2016
UINMF performs mosaic integration of single-cell multi-omic datasets using nonnegative matrix factorization AR Kriebel, JD Welch Nature communications 13 (1), 780, 2022	71	2022
G-CSF secreted by mutant IDH1 glioma stem cells abolishes myeloid cell immunosuppression and enhances the efficacy of immunotherapy MS Alghamri, BL McClellan, RP Avvari, R Thalla, S Carney, CS Hartlage, ... Science Advances 7 (40), eabh3243, 2021	71	2021
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ... Biorxiv, 2020.02. 29.970558, 2020	64	2020
Deep sequencing shows multiple oligouridylations are required for 3′ to 5′ degradation of histone mRNAs on polyribosomes MK Slevin, S Meaux, JD Welch, R Bigler, PLM de Marval, W Su, ... Molecular cell 53 (6), 1020-1030, 2014	61	2014
Robust detection of alternative splicing in a population of single cells JD Welch, Y Hu, JF Prins Nucleic acids research 44 (8), e73-e73, 2016	59	2016
SquiggleNet: real-time, direct classification of nanopore signals Y Bao, J Wadden, JR Erb-Downward, P Ranjan, W Zhou, TL McDonald, ... Genome biology 22, 1-16, 2021	57	2021
TUT7 catalyzes the uridylation of the 3′ end for rapid degradation of histone mRNA PE Lackey, JD Welch, WF Marzluff Rna 22 (11), 1673-1688, 2016	54	2016

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