Rob Knight

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J Gregory CaporasoNorthern Arizona UniversityE-mailová adresa ověřena na: nau.edu
Daniel McDonaldAmerican Gut, Knight Lab, Department of Pediatrics, UCSDE-mailová adresa ověřena na: ucsd.edu
Antonio GonzálezProgrammer Analyst, UC San DiegoE-mailová adresa ověřena na: ucsd.edu
Catherine LozuponeAssociate Professor of Medicine, University of Colorado, DenverE-mailová adresa ověřena na: ucdenver.edu
Noah FiererProfessor, University of Colorado at BoulderE-mailová adresa ověřena na: colorado.edu
Jack A GilbertUniversity of California, San DiegoE-mailová adresa ověřena na: ucsd.edu
Pieter C DorresteinUCSDE-mailová adresa ověřena na: ucsd.edu
Christian L LauberNationwide Children's HospitalE-mailová adresa ověřena na: nationwidechildrens.org
Dan KnightsUniversity of MinnesotaE-mailová adresa ověřena na: umn.edu
William A WaltersPost-doc, Cornell UniversityE-mailová adresa ověřena na: colorado.edu
Yoshiki Vázquez-BaezaBiomeSenseE-mailová adresa ověřena na: biomesense.com
Ruth E. LeyDepartment of Microbiome Science, Max Planck Institute for Biology, TübingenE-mailová adresa ověřena na: tuebingen.mpg.de
Jose C. ClementeAssociate Professor, Icahn School of Medicine at Mount SinaiE-mailová adresa ověřena na: mssm.edu
Se Jin SongUniversity of California San DiegoE-mailová adresa ověřena na: ucsd.edu
Zhenjiang Zech Xustate key lab of food science and resources, nuE-mailová adresa ověřena na: ucsd.edu
Jessica L. MetcalfProfessor, Colorado State University, Fort Collins, COE-mailová adresa ověřena na: colostate.edu
Janet K. JanssonChief Biologist, Pacific Northwest National LabE-mailová adresa ověřena na: pnnl.gov
James T. MortonE-mailová adresa ověřena na: gutzanalytics.com
Peter TurnbaughUniversity of California, San FranciscoE-mailová adresa ověřena na: ucsf.edu
Luke K UrsellBiota TechnologyE-mailová adresa ověřena na: biota.com

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Rob Knight

Wolfe Family Chair at Rady Children's; Director, Center for Microbiome Innovation; Professor, UCSD

E-mailová adresa ověřena na: ucsd.edu - Domovská stránka

microbial diversity microbiome environmental microbiology


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335-336, 2010	36422	2010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	18477	2019
UCHIME improves sensitivity and speed of chimera detection RC Edgar, BJ Haas, JC Clemente, C Quince, R Knight Bioinformatics 27 (16), 2194-2200, 2011	14927	2011
Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012	10998	2012
A core gut microbiome in obese and lean twins PJ Turnbaugh, M Hamady, T Yatsunenko, BL Cantarel, A Duncan, RE Ley, ... nature 457 (7228), 480-484, 2009	9526	2009
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, CA Lozupone, ... Proceedings of the national academy of sciences 108 (supplement_1), 4516-4522, 2011	9471	2011
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, J Huntley, N Fierer, ... The ISME journal 6 (8), 1621-1624, 2012	9146	2012
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ... Nature biotechnology 31 (9), 814-821, 2013	9017	2013
Human gut microbiome viewed across age and geography T Yatsunenko, FE Rey, MJ Manary, I Trehan, MG Dominguez-Bello, ... nature 486 (7402), 222-227, 2012	8727	2012
UniFrac: a new phylogenetic method for comparing microbial communities C Lozupone, R Knight Applied and environmental microbiology 71 (12), 8228-8235, 2005	8612	2005
Obesity alters gut microbial ecology RE Ley, F Bäckhed, P Turnbaugh, CA Lozupone, RD Knight, JI Gordon Proceedings of the national academy of sciences 102 (31), 11070-11075, 2005	7621	2005
The human microbiome project PJ Turnbaugh, RE Ley, M Hamady, CM Fraser-Liggett, R Knight, ... Nature 449 (7164), 804-810, 2007	7483	2007
Linking long-term dietary patterns with gut microbial enterotypes GD Wu, J Chen, C Hoffmann, K Bittinger, YY Chen, SA Keilbaugh, ... Science 334 (6052), 105-108, 2011	7444	2011
Diversity, stability and resilience of the human gut microbiota CA Lozupone, JI Stombaugh, JI Gordon, JK Jansson, R Knight Nature 489 (7415), 220-230, 2012	6067	2012
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns MG Dominguez-Bello, EK Costello, M Contreras, M Magris, G Hidalgo, ... Proceedings of the National Academy of Sciences 107 (26), 11971-11975, 2010	5948	2010
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ... The ISME journal 6 (3), 610-618, 2012	5466	2012
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin NA Bokulich, BD Kaehler, JR Rideout, M Dillon, E Bolyen, R Knight, ... Microbiome 6, 1-17, 2018	4698	2018
The impact of the gut microbiota on human health: an integrative view JC Clemente, LK Ursell, LW Parfrey, R Knight Cell 148 (6), 1258-1270, 2012	4395	2012
Gut microbiota from twins discordant for obesity modulate metabolism in mice VK Ridaura, JJ Faith, FE Rey, J Cheng, AE Duncan, AL Kau, NW Griffin, ... Science 341 (6150), 1241214, 2013	4374	2013
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing NA Bokulich, S Subramanian, JJ Faith, D Gevers, JI Gordon, R Knight, ... Nature methods 10 (1), 57-59, 2013	4155	2013

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