Simultaneous cross-evaluation of heterogeneous E. coli datasets via mechanistic simulation DN Macklin, TA Ahn-Horst, H Choi, NA Ruggero, J Carrera, JC Mason, ... Science 369 (6502), eaav3751, 2020 | 151 | 2020 |
The EcoCyc Database (2023) PD Karp, S Paley, R Caspi, A Kothari, M Krummenacker, PE Midford, ... EcoSal Plus 11 (1), eesp-0002-2023, 2023 | 49 | 2023 |
An expanded whole-cell model of E. coli links cellular physiology with mechanisms of growth rate control TA Ahn-Horst, LS Mille, G Sun, JH Morrison, MW Covert NPJ Systems Biology and Applications 8 (1), 30, 2022 | 26 | 2022 |
The E. coli whole-cell modeling project G Sun, TA Ahn-Horst, MW Covert EcoSal plus 9 (2), eESP-0001-2020, 2021 | 25 | 2021 |
BeReTa: a systematic method for identifying target transcriptional regulators to enhance microbial production of chemicals M Kim, G Sun, DY Lee, BG Kim Bioinformatics 33 (1), 87-94, 2017 | 13 | 2017 |
Cross-evaluation of E. coli’s operon structures via a whole-cell model suggests alternative cellular benefits for low-versus high-expressing operons G Sun, MM DeFelice, TE Gillies, TA Ahn-Horst, CJ Andrews, ... Cell Systems 15 (3), 227-245. e7, 2024 | 2 | 2024 |
Development of Quenching-qPCR (QQ) assay for measuring absolute intracellular cleavage efficiency of ribozyme MW Kim, G Sun, JH Lee, B Kim Analytical Biochemistry 550, 27-33, 2018 | 1 | 2018 |
Genome modeling and design across all domains of life with Evo 2 G Brixi, MG Durrant, J Ku, M Poli, G Brockman, D Chang, GA Gonzalez, ... bioRxiv, 2025.02. 18.638918, 2025 | | 2025 |
Model-Driven Discovery Through a Whole-Cell Computational Model of Escherichia Coli G Sun Stanford University, 2024 | | 2024 |