Jaak Vilo

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Alvis BrazmaEMBL Scientist EmeritusE-mailová adresa ověřena na: ebi.ac.uk
Hedi PetersonProfessor of Bioinformatics, University of Tartu; ELIXIR Estonia;E-mailová adresa ověřena na: ut.ee
Raivo KoldeSenior Research Fellow, University of TartuE-mailová adresa ověřena na: ut.ee
Priit AdlerUniversity of TartuE-mailová adresa ověřena na: ut.ee
Sulev ReisbergPhD, University of TartuE-mailová adresa ověřena na: ut.ee
Liis KolbergUniversity of TartuE-mailová adresa ověřena na: ut.ee
Ugis SarkansTechnical team leader, EMBL-EBIE-mailová adresa ověřena na: ebi.ac.uk
Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Senior ScientistE-mailová adresa ověřena na: ebi.ac.uk
Sven LaurAssociate Professor in Privacy-Preserving Data Mining, University of TartuE-mailová adresa ověřena na: ut.ee
Meelis KullProfessor of Artificial Intelligence, University of TartuE-mailová adresa ověřena na: ut.ee
Andres MetspaluUniversity of TartuE-mailová adresa ověřena na: ut.ee
Tauno MetsaluUniveristy of TartuE-mailová adresa ověřena na: ut.ee
Reedik MägiEstonian Genome Center, University of TartuE-mailová adresa ověřena na: ut.ee
Andres SalumetsUniversity of TartuE-mailová adresa ověřena na: ccht.ee
Lili MilaniEstonian Genome Centre, Institute of Genomics, University of TartuE-mailová adresa ověřena na: ut.ee
Inge JonassenProfessor, Head of Department of Informatics, University of BergenE-mailová adresa ověřena na: uib.no
Martin VingronMax-Planck-Institut für molekulare GenetikE-mailová adresa ověřena na: molgen.mpg.de
Susanna-Assunta SansoneUniversity of Oxford, Academic Lead for Research Practice; Professor of Data ReadinessE-mailová adresa ověřena na: oerc.ox.ac.uk
Pärt PetersonProfessor of Molecular Immunology, University of Tartu, EstoniaE-mailová adresa ověřena na: ut.ee
Balaji RajashekarBioinformatics Researcher at University of Tartu, EstoniaE-mailová adresa ověřena na: ut.ee

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Jaak Vilo

Prof. of Bioinformatics, Institute of Computer Science, University of Tartu, Estonia

E-mailová adresa ověřena na: ut.ee - Domovská stránka

Bioinformatics Data Mining Health Informatics #unitartucs


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4981	2001
g: Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update) U Raudvere, L Kolberg, I Kuzmin, T Arak, P Adler, H Peterson, J Vilo Nucleic acids research 47 (W1), W191-W198, 2019	4909	2019
ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap T Metsalu, J Vilo Nucleic acids research 43 (W1), W566-W570, 2015	3449	2015
g: Profiler—a web-based toolset for functional profiling of gene lists from large-scale experiments J Reimand, M Kull, H Peterson, J Hansen, J Vilo Nucleic acids research 35 (suppl_2), W193-W200, 2007	1497	2007
g: Profiler—a web server for functional interpretation of gene lists (2016 update) J Reimand, T Arak, P Adler, L Kolberg, S Reisberg, H Peterson, J Vilo Nucleic acids research, gkw199, 2016	1413	2016
ArrayExpress—a public repository for microarray gene expression data at the EBI A Brazma, H Parkinson, U Sarkans, M Shojatalab, J Vilo, ... Nucleic acids research 31 (1), 68-71, 2003	1141	2003
Robust rank aggregation for gene list integration and meta-analysis R Kolde, S Laur, P Adler, J Vilo Bioinformatics 28 (4), 573-580, 2012	1041	2012
Gene expression data analysis A Brazma, J Vilo FEBS letters 480 (1), 17-24, 2000	942	2000
gprofiler2--an R package for gene list functional enrichment analysis and namespace conversion toolset g: Profiler L Kolberg, U Raudvere, I Kuzmin, J Vilo, H Peterson F1000Research 9, 2020	709	2020
g: Profiler—a web server for functional interpretation of gene lists (2011 update) J Reimand, T Arak, J Vilo Nucleic acids research 39 (suppl_2), W307-W315, 2011	578	2011
A first-generation linkage disequilibrium map of human chromosome 22 E Dawson, GR Abecasis, S Bumpstead, Y Chen, S Hunt, DM Beare, ... Nature 418 (6897), 544-548, 2002	551	2002
g: Profiler—interoperable web service for functional enrichment analysis and gene identifier mapping (2023 update) L Kolberg, U Raudvere, I Kuzmin, P Adler, J Vilo, H Peterson Nucleic acids research 51 (W1), W207-W212, 2023	526	2023
Predicting gene regulatory elements in silico on a genomic scale A Brāzma, I Jonassen, J Vilo, E Ukkonen Genome research 8 (11), 1202-1215, 1998	492	1998
ArrayExpress—a public repository for microarray gene expression data at the EBI H Parkinson, U Sarkans, M Shojatalab, N Abeygunawardena, S Contrino, ... Nucleic acids research 33 (suppl_1), D553-D555, 2005	476	2005
MethSurv: a web tool to perform multivariable survival analysis using DNA methylation data V Modhukur, T Iljasenko, T Metsalu, K Lokk, T Laisk-Podar, J Vilo Epigenomics 10 (3), 277-288, 2018	461	2018
DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns K Lokk, V Modhukur, B Rajashekar, K Märtens, R Mägi, R Kolde, ... Genome biology 15, 1-14, 2014	443	2014
Protein interaction verification and functional annotation by integrated analysis of genome-scale data P Kemmeren, NL van Berkum, J Vilo, T Bijma, R Donders, A Brazma, ... Molecular cell 9 (5), 1133-1143, 2002	277	2002
Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach AK Krug, R Kolde, JA Gaspar, E Rempel, NV Balmer, K Meganathan, ... Archives of Toxicology, 1-21, 2012	254	2012
Meta‐analysis of microRNA expression in lung cancer U Vosa, T Vooder, R Kolde, J Vilo, A Metspalu, T Annilo International journal of cancer 132 (12), 2884-2893, 2013	247	2013
A preclinical model for ERα-positive breast cancer points to the epithelial microenvironment as determinant of luminal phenotype and hormone response G Sflomos, V Dormoy, T Metsalu, R Jeitziner, L Battista, V Scabia, ... Cancer cell 29 (3), 407-422, 2016	224	2016

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