Kasper D. Hansen

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Andrew P. FeinbergDirector, Center for Epigenetics; Bloomberg Distinguished Professor, Johns Hopkins UniversityE-mailová adresa ověřena na: jhu.edu
Rafael A IrizarryProfessor, Biostatistics and Computational Biology, Dana-Farber and HarvardE-mailová adresa ověřena na: ds.dfci.harvard.edu
Ben LangmeadAssociate Professor of Computer Science, Johns Hopkins UniversityE-mailová adresa ověřena na: cs.jhu.edu
Andrew E. JaffeVP, Head of Data Sciences, Neumora TherapeuticsE-mailová adresa ověřena na: neumoratx.com
Hector Corrada BravoAssociate Professor of Computer Science, University of MarylandE-mailová adresa ověřena na: umiacs.umd.edu
Martin J. AryeeAssociate Professor, Dept of Data Science, Dana Farber Cancer Institute & Dept of Pathology, HarvardE-mailová adresa ověřena na: ds.dfci.harvard.edu
Jeff LeekChief Data Officer, VP, and J Orin Edson Foundation Professor, Fred Hutchinson Cancer CenterE-mailová adresa ověřena na: fredhutch.org
Jean-Philippe FortinSenior Principal Scientist, gRED, GenentechE-mailová adresa ověřena na: gene.com
Sandrine DudoitDivision of Biostatistics and Department of Statistics, University of California, BerkeleyE-mailová adresa ověřena na: stat.berkeley.edu
Christine Ladd-AcostaAssociate Professor, Johns Hopkins Bloomberg School of Public HealthE-mailová adresa ověřena na: jhsph.edu
Hans Tomas BjornssonProf. University of Iceland, Assoc. Prof. JHU, Clinical Director, LandspitaliE-mailová adresa ověřena na: hi.is
Sean DavisUniversity of ColoradoE-mailová adresa ověřena na: cuanschutz.edu
Leandros BoukasPediatrics resident, Children's National HospitalE-mailová adresa ověřena na: jhmi.edu
Levi WaldronCity University of New York Graduate School of Public Health and Health PolicyE-mailová adresa ověřena na: sph.cuny.edu
Loyal A. GoffJohns Hopkins Institute of Genetic MedicineE-mailová adresa ověřena na: jhmi.edu
Sarven SabunciyanJohns Hopkins UniversityE-mailová adresa ověřena na: jhmi.edu
Elana J FertigDirector of Institute for Genome Sciences, University of Maryland School of MedicineE-mailová adresa ověřena na: som.umaryland.edu
zhijin wuBrown UniversityE-mailová adresa ověřena na: brown.edu
Wolfgang HuberEMBL - European Molecular Biology LaboratoryE-mailová adresa ověřena na: embl.org
Leonardo Collado-TorresInvestigator at LIBD + Asst. Prof., Department of Biostatistics, JHBSPHE-mailová adresa ověřena na: libd.org

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Kasper D. Hansen

Department of Biostatistics, Johns Hopkins University

E-mailová adresa ověřena na: jhsph.edu - Domovská stránka

Computational Biology Biostatistics Statistical Genomics Epigenetics Genomics


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays MJ Aryee, AE Jaffe, H Corrada-Bravo, C Ladd-Acosta, AP Feinberg, ... Bioinformatics 30 (10), 1363-1369, 2014	4026	2014
Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115-121, 2015	3700	2015
Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017	3601	2017
The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020	3319	2020
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments JH Bullard, E Purdom, KD Hansen, S Dudoit BMC bioinformatics 11, 1-13, 2010	2164	2010
Increased methylation variation in epigenetic domains across cancer types KD Hansen, W Timp, HC Bravo, S Sabunciyan, B Langmead, ... Nature genetics 43 (8), 768-775, 2011	1232	2011
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ... Science 330 (6012), 1787-1797, 2010	1115	2010
Biases in Illumina transcriptome sequencing caused by random hexamer priming KD Hansen, SE Brenner, S Dudoit Nucleic acids research 38 (12), e131-e131, 2010	916	2010
Functional normalization of 450k methylation array data improves replication in large cancer studies JP Fortin, A Labbe, M Lemire, BW Zanke, TJ Hudson, EJ Fertig, ... Genome biology 15 (11), 503, 2014	876	2014
The impact of sex on gene expression across human tissues M Oliva, M Muñoz-Aguirre, S Kim-Hellmuth, V Wucher, ADH Gewirtz, ... Science 369 (6509), eaba3066, 2020	864	2020
BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions KD Hansen, B Langmead, RA Irizarry Genome biology 13, 1-10, 2012	816	2012
Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi JP Fortin, TJ Triche Jr, KD Hansen Bioinformatics 33 (4), 558-560, 2017	769	2017
Removing technical variability in RNA-seq data using conditional quantile normalization KD Hansen, RA Irizarry, Z Wu Biostatistics 13 (2), 204-216, 2012	712	2012
Dynamic landscape and regulation of RNA editing in mammals MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ... Nature 550 (7675), 249-254, 2017	607	2017
Cloud-scale RNA-sequencing differential expression analysis with Myrna B Langmead, KD Hansen, JT Leek Genome biology 11, 1-11, 2010	441	2010
Reproducible RNA-seq analysis using recount2 L Collado-Torres, A Nellore, K Kammers, SE Ellis, MA Taub, KD Hansen, ... Nature biotechnology 35 (4), 319-321, 2017	421	2017
Common DNA methylation alterations in multiple brain regions in autism C Ladd-Acosta, KD Hansen, E Briem, MD Fallin, WE Kaufmann, ... Molecular psychiatry 19 (8), 862-871, 2014	389	2014
A quantitative proteome map of the human body L Jiang, M Wang, S Lin, R Jian, X Li, J Chan, G Dong, H Fang, ... Cell 183 (1), 269-283. e19, 2020	375	2020
Reversible switching between epigenetic states in honeybee behavioral subcastes BR Herb, F Wolschin, KD Hansen, MJ Aryee, B Langmead, R Irizarry, ... Nature neuroscience 15 (10), 1371-1373, 2012	370	2012
Social environment is associated with gene regulatory variation in the rhesus macaque immune system J Tung, LB Barreiro, ZP Johnson, KD Hansen, V Michopoulos, D Toufexis, ... Proceedings of the National Academy of Sciences 109 (17), 6490-6495, 2012	361	2012

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