Samuel Chaffron

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Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsE-mailová adresa ověřena na: imls.uzh.ch
Peer BorkDirector of EMBL HeidelbergE-mailová adresa ověřena na: embl.de
Damien EveillardNantes Université, Centrale Nantes, CNRS, LS2N, Université de NantesE-mailová adresa ověřena na: univ-nantes.fr
Chris BowlerCNRS Director of Research, IBENS, Paris / President of the Stazione Zoologica Anton Dohrn, NaplesE-mailová adresa ověřena na: biologie.ens.fr
Michael Kuhnresearch staff scientist & research coordinator in the lab of Peer Bork, EMBLE-mailová adresa ověřena na: embl.de
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumE-mailová adresa ověřena na: med.kuleuven.be
Bärbel StecherProfessor of Microbiology, Ludwig-Maximilians-University MunichE-mailová adresa ověřena na: mvp.lmu.de
Wolf-Dietrich HardtProfessor für Mikrobiologie, ETH ZurichE-mailová adresa ověřena na: micro.biol.ethz.ch
Lars Juhl JensenUniversity of CopenhagenE-mailová adresa ověřena na: cpr.ku.dk
Karsenti EricSenior scientist EMBLE-mailová adresa ověřena na: embl.de
Silvia G. AcinasDepartment of Marine Biology and Oceanography; Institute of Marine Sciences (ICM)-CSICE-mailová adresa ověřena na: icm.csic.es
Lionel GuidiCNRS, Sorbonne University, Laboratoire d'oceanographie de VillefrancheE-mailová adresa ověřena na: imev-mer.fr
Youssef DarziIndependentE-mailová adresa ověřena na: omixer.io
Vorholt Julia A.ETH ZurichE-mailová adresa ověřena na: micro.biol.ethz.ch
Dr. Nathanaël DelmotteE-mailová adresa ověřena na: alumni.ethz.ch
Claudia KniefUniversity of BonnE-mailová adresa ověřena na: uni-bonn.de
Nicolas HenryStation Biologique de Roscoff, ABIMS bioinformatic platform, FranceE-mailová adresa ověřena na: sb-roscoff.fr
Philippe JulienCenter for Genomic Regulation (CRG - Barcelona)E-mailová adresa ověřena na: unil.ch
Milan SimonovićScientific programmer, University of ZürichE-mailová adresa ověřena na: imls.uzh.ch
Chris CreeveyProfessor of Computational Biology, Queen’s University BelfastE-mailová adresa ověřena na: qub.ac.uk

Sledovat

Samuel Chaffron

LS2N - CNRS UMR 6004 - Nantes University

E-mailová adresa ověřena na: univ-nantes.fr - Domovská stránka

Computational Biology Systems Ecology Microbial ecology and evolution Microbiomes


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
STRING 8—a global view on proteins and their functional interactions in 630 organisms LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ... Nucleic acids research 37 (suppl_1), D412-D416, 2009	2971	2009
Structure and function of the global ocean microbiome S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ... Science 348 (6237), 1261359, 2015	2623	2015
Population-level analysis of gut microbiome variation G Falony, M Joossens, S Vieira-Silva, J Wang, Y Darzi, K Faust, ... Science 352 (6285), 560-564, 2016	2327	2016
Eukaryotic plankton diversity in the sunlit ocean C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ... Science 348 (6237), 1261605, 2015	1885	2015
Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota B Stecher, R Robbiani, AW Walker, AM Westendorf, M Barthel, M Kremer, ... PLoS biology 5 (10), e244, 2007	1231	2007
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria N Delmotte, C Knief, S Chaffron, G Innerebner, B Roschitzki, ... Proceedings of the National Academy of Sciences 106 (38), 16428-16433, 2009	954	2009
Determinants of community structure in the global plankton interactome G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ... Science 348 (6237), 1262073, 2015	929	2015
STRING 7—recent developments in the integration and prediction of protein interactions C Von Mering, LJ Jensen, M Kuhn, S Chaffron, T Doerks, B Krüger, B Snel, ... Nucleic acids research 35 (suppl_1), D358-D362, 2007	812	2007
Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016	792	2016
Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice C Knief, N Delmotte, S Chaffron, M Stark, G Innerebner, R Wassmann, ... The ISME journal 6 (7), 1378-1390, 2012	775	2012
Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 1261498, 2015	727	2015
A global network of coexisting microbes from environmental and whole-genome sequence data S Chaffron, H Rehrauer, J Pernthaler, C Von Mering Genome research 20 (7), 947-959, 2010	547	2010
Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria B Stecher, S Chaffron, R Käppeli, S Hapfelmeier, S Freedrich, TC Weber, ... PLoS pathogens 6 (1), e1000711, 2010	500	2010
The Microbiota Mediates Pathogen Clearance from the Gut Lumen after Non-Typhoidal Salmonella Diarrhea K Endt, B Stecher, S Chaffron, E Slack, N Tchitchek, A Benecke, ... PLoS pathogens 6 (9), e1001097, 2010	419	2010
Species–function relationships shape ecological properties of the human gut microbiome S Vieira-Silva, G Falony, Y Darzi, G Lima-Mendez, R Garcia Yunta, ... Nature microbiology 1 (8), 1-8, 2016	383	2016
The use of next generation sequencing for improving food safety: Translation into practice B Jagadeesan, P Gerner-Smidt, MW Allard, S Leuillet, A Winkler, Y Xiao, ... Food microbiology 79, 96-115, 2019	357	2019
Population-level analysis of Blastocystis subtype prevalence and variation in the human gut microbiota RY Tito, S Chaffron, C Caenepeel, G Lima-Mendez, J Wang, ... Gut 68 (7), 1180-1189, 2019	218	2019
Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome AA Zayed, JM Wainaina, G Dominguez-Huerta, E Pelletier, J Guo, ... Science 376 (6589), 156-162, 2022	185	2022
Tara Oceans coordinators S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ... Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon …, 2015	156	2015
Mechanically induced development and maturation of human intestinal organoids in vivo HM Poling, D Wu, N Brown, M Baker, TA Hausfeld, N Huynh, S Chaffron, ... Nature biomedical engineering 2 (6), 429-442, 2018	113	2018

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