Jonathan Carlson

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Zabrina BrummeAssociate Professor, Faculty of Health Sciences, Simon Fraser UniversityE-mailová adresa ověřena na: sfu.ca
Chanson BrummeAssistant Professor, Faculty of Medicine, University of British ColumbiaE-mailová adresa ověřena na: bccfe.ca
Simon MallalDirector, Institute for Immunology and Infectious Diseases, Murdoch University, Western AustraliaE-mailová adresa ověřena na: iiid.com.au
Mark A. BrockmanSimon Fraser University and BC Centre for Excellence in HIV/AIDSE-mailová adresa ověřena na: sfu.ca
Philippa C. MatthewsThe Francis Crick Institute | University College LondonE-mailová adresa ověřena na: crick.ac.uk
Goepfert, PAUniversity of Alabama at BirminghamE-mailová adresa ověřena na: uab.edu
Eric HunterEmory UniversityE-mailová adresa ověřena na: emory.edu
Todd M. AllenProfessor of Medicine, Ragon Institute of MGH, MIT and HarvardE-mailová adresa ověřena na: partners.org
Jennifer ListgartenProfessor, UC Berkeley EECS and Center for Computational BiologyE-mailová adresa ověřena na: berkeley.edu
Tanmoy BhattacharyaLos Alamos National Laboratory, Santa Fe InstituteE-mailová adresa ověřena na: santafe.edu
Bette KorberLos Alamos National LaboratoryE-mailová adresa ověřena na: lanl.gov
Nico Pfeiferfull Professor @ University of TübingenE-mailová adresa ověřena na: mpi-inf.mpg.de
Morgane RollandMHRP|HJFE-mailová adresa ověřena na: hivresearch.org
Yaoyu E. WangQuantitative Biomedical Research Center, Harvard T.H. Chan School of Public HealthE-mailová adresa ověřena na: hsph.harvard.edu
Luke C Swenson, MD, PhDUniversity of TorontoE-mailová adresa ověřena na: mail.utoronto.ca
Florencia Pereyra SegalMass General Brigham, Harvard Medical School, Boston, MAE-mailová adresa ověřena na: partners.org
Robert HoggFaculty of Health Sciences, Simon Fraser UniversityE-mailová adresa ověřena na: sfu.ca
Richard AppsE-mailová adresa ověřena na: mail.nih.gov
Guy ShaniBen Gurion UniversityE-mailová adresa ověřena na: bgu.ac.il
Bongshin LeeYonsei UniversityE-mailová adresa ověřena na: yonsei.ac.kr

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Jonathan Carlson

Managing Director, Health Futures, Microsoft Research

E-mailová adresa ověřena na: microsoft.com - Domovská stránka

Computational Biology HIV Immunology Virology


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
The major genetic determinants of HIV-1 control affect HLA class I peptide presentation International HIV Controllers Study Science 330 (6010), 1551-1557, 2010	1151	2010
Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env V2 M Rolland, PT Edlefsen, BB Larsen, S Tovanabutra, E Sanders-Buell, ... Nature 490 (7420), 417-420, 2012	494	2012
HIV-1 adaptation to NK-cell-mediated immune pressure G Alter, D Heckerman, A Schneidewind, L Fadda, CM Kadie, JM Carlson, ... Nature 476 (7358), 96-100, 2011	465	2011
Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment‐naive patients T Kuntzen, J Timm, A Berical, N Lennon, AM Berlin, SK Young, B Lee, ... Hepatology 48 (6), 1769-1778, 2008	434	2008
Influence of HLA-C expression level on HIV control R Apps, Y Qi, JM Carlson, H Chen, X Gao, R Thomas, Y Yuki, ... Science 340 (6128), 87-91, 2013	417	2013
Founder effects in the assessment of HIV polymorphisms and HLA allele associations T Bhattacharya, M Daniels, D Heckerman, B Foley, N Frahm, C Kadie, ... science 315 (5818), 1583-1586, 2007	309	2007
Selection bias at the heterosexual HIV-1 transmission bottleneck JM Carlson, M Schaefer, DC Monaco, R Batorsky, DT Claiborne, J Prince, ... Science 345 (6193), 1254031, 2014	298	2014
Transmission of HIV-1 Gag immune escape mutations is associated with reduced viral load in linked recipients PA Goepfert, W Lumm, P Farmer, P Matthews, A Prendergast, JM Carlson, ... The Journal of experimental medicine 205 (5), 1009-1017, 2008	267	2008
Marked epitope-and allele-specific differences in rates of mutation in human immunodeficiency type 1 (HIV-1) Gag, Pol, and Nef cytotoxic T-lymphocyte epitopes in acute/early … ZL Brumme, CJ Brumme, J Carlson, H Streeck, M John, Q Eichbaum, ... Journal of virology 82 (18), 9216, 2008	224	2008
HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins ZL Brumme, M John, JM Carlson, CJ Brumme, D Chan, MA Brockman, ... PloS one 4 (8), e6687, 2009	210	2009
Magnitude and dynamics of the T-cell response to SARS-CoV-2 infection at both individual and population levels TM Snyder, RM Gittelman, M Klinger, DH May, EJ Osborne, R Taniguchi, ... Frontiers in Immunology 15, 1488860, 2025	209	2025
Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1 ZL Brumme, CJ Brumme, D Heckerman, BT Korber, M Daniels, J Carlson, ... PLoS pathogens 3 (7), e94, 2007	206	2007
Additive contribution of HLA class I alleles in the immune control of HIV-1 infection A Leslie, PC Matthews, J Listgarten, JM Carlson, C Kadie, T Ndung'u, ... Journal of virology 84 (19), 9879-9888, 2010	197	2010
A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2 S Nolan, M Vignali, M Klinger, JN Dines, IM Kaplan, E Svejnoha, T Craft, ... Research square, 2020	192	2020
Central role of reverting mutations in HLA associations with human immunodeficiency virus set point PC Matthews, A Prendergast, A Leslie, H Crawford, R Payne, ... Journal of virology 82 (17), 8548-8559, 2008	177	2008
Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag JM Carlson, ZL Brumme, CM Rousseau, CJ Brumme, P Matthews, ... PLoS computational biology 4 (11), e1000225, 2008	171	2008
HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load CM Rousseau, MG Daniels, JM Carlson, C Kadie, H Crawford, ... Journal of virology 82 (13), 6434-6446, 2008	169	2008
Elevated HLA-A expression impairs HIV control through inhibition of NKG2A-expressing cells V Ramsuran, V Naranbhai, A Horowitz, Y Qi, MP Martin, Y Yuki, X Gao, ... Science 359 (6371), 86-90, 2018	160	2018
Genetic characterization of human immunodeficiency virus type 1 in elite controllers: lack of gross genetic defects or common amino acid changes T Miura, MA Brockman, CJ Brumme, ZL Brumme, JM Carlson, F Pereyra, ... Journal of virology 82 (17), 8422-8430, 2008	156	2008
Protective HLA Class I Alleles That Restrict Acute-Phase CD8⁺ T-Cell Responses Are Associated with Viral Escape Mutations Located in Highly Conserved … YE Wang, B Li, JM Carlson, H Streeck, AD Gladden, R Goodman, ... Journal of virology 83 (4), 1845-1855, 2009	155	2009

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