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Damiano Piovesan
Damiano Piovesan
Associate Professor, University of Padova
E-mailová adresa ověřena na: unipd.it - Domovská stránka
Název
Citace
Citace
Rok
The Pfam protein families database in 2019
S El-Gebali, J Mistry, A Bateman, SR Eddy, A Luciani, SC Potter, ...
Nucleic acids research 47 (D1), D427-D432, 2019
46062019
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
16112017
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature methods 10 (3), 221-227, 2013
11312013
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17, 1-19, 2016
4462016
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20, 1-23, 2019
4352019
The RING 2.0 web server for high quality residue interaction networks
D Piovesan, G Minervini, SCE Tosatto
Nucleic acids research 44 (W1), W367-W374, 2016
4312016
DisProt 7.0: a major update of the database of disordered proteins
D Piovesan, F Tabaro, I Mičetić, M Necci, F Quaglia, CJ Oldfield, ...
Nucleic acids research 45 (D1), D219-D227, 2017
3392017
Critical assessment of protein intrinsic disorder prediction
M Necci, D Piovesan, SCE Tosatto
Nature methods 18 (5), 472-481, 2021
2752021
DisProt: intrinsic protein disorder annotation in 2020
A Hatos, B Hajdu-Soltész, AM Monzon, N Palopoli, L Álvarez, ...
Nucleic acids research 48 (D1), D269-D276, 2020
2612020
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins
D Piovesan, F Tabaro, L Paladin, M Necci, I Mičetić, C Camilloni, N Davey, ...
Nucleic acids research 46 (D1), D471-D476, 2018
2262018
MobiDB: intrinsically disordered proteins in 2021
D Piovesan, M Necci, N Escobedo, AM Monzon, A Hatos, I Mičetić, ...
Nucleic acids research 49 (D1), D361-D367, 2021
2202021
MobiDB-lite: fast and highly specific consensus prediction of intrinsic disorder in proteins
M Necci, D Piovesan, Z Dosztányi, SCE Tosatto
Bioinformatics 33 (9), 1402-1404, 2017
2012017
DOME: recommendations for supervised machine learning validation in biology
I Walsh, D Fishman, D Garcia-Gasulla, T Titma, G Pollastri, J Harrow, ...
Nature methods 18 (10), 1122-1127, 2021
1892021
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
F Quaglia, B Mészáros, E Salladini, A Hatos, R Pancsa, LB Chemes, ...
Nucleic acids research 50 (D1), D480-D487, 2022
1562022
PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
T Lazar, E Martínez-Pérez, F Quaglia, A Hatos, LB Chemes, JA Iserte, ...
Nucleic acids research 49 (D1), D404-D411, 2021
1292021
Simultaneous quantification of protein order and disorder
P Sormanni, D Piovesan, GT Heller, M Bonomi, P Kukic, C Camilloni, ...
Nature chemical biology 13 (4), 339-342, 2017
1262017
RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles
D Clementel, A Del Conte, AM Monzon, GF Camagni, G Minervini, ...
Nucleic acids research 50 (W1), W651-W656, 2022
1232022
MobiDB: 10 years of intrinsically disordered proteins
D Piovesan, A Del Conte, D Clementel, AM Monzon, M Bevilacqua, ...
Nucleic acids research 51 (D1), D438-D444, 2023
1182023
Intrinsic protein disorder and conditional folding in AlphaFoldDB
D Piovesan, AM Monzon, SCE Tosatto
Protein Science 31 (11), e4466, 2022
992022
INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity
D Piovesan, M Giollo, E Leonardi, C Ferrari, SCE Tosatto
Nucleic acids research 43 (W1), W134-W140, 2015
982015
Systém momentálně nemůže danou operaci provést. Zkuste to znovu později.
Články 1–20