Shandar Ahmad

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Akinori SaraiProfessor, Kyushu Institute of TechnologyE-mailová adresa ověřena na: sanzo.org
M. Michael GromihaIndian Institute of Technology MadrasE-mailová adresa ověřena na: iitm.ac.in
Kenji MizuguchiOsaka University / National Institutes of Biomedical Innovation, Health and NutritionE-mailová adresa ověřena na: protein.osaka-u.ac.jp
Adeel MalikSangmyung University, SeoulE-mailová adresa ověřena na: procarb.org
Ruth NussinovProfessor and Senior Principal Investigator, National Cancer Institute and Tel Aviv UniversityE-mailová adresa ověřena na: post.tau.ac.il
Marcos J Arauzo-BravoIkerbasque Professor at BioDonostia Health Research Institute, San Sebastian SpainE-mailová adresa ověřena na: biodonostia.org
Michael Fernandez LlamosaMachine Learning SpecialistE-mailová adresa ověřena na: applusrtd.com
Dr. sucheta chauhanResearch Scholar, Jawaharlal Nehru UniversityE-mailová adresa ověřena na: jnu.ac.in
Diego Miranda-Saavedradiego@ifrec.osaka-u.ac.jpE-mailová adresa ověřena na: ifrec.osaka-u.ac.jp
Andrew P HutchinsSouthern University of Science and TechnologyE-mailová adresa ověřena na: sustech.edu.cn
Kochetov AVDirector, Institute of Cytology & GeneticsE-mailová adresa ověřena na: bionet.nsc.ru
MANISHA KALSANPhD Computational Biology and Bioinformatics, Jawaharlal Nehru UniversityE-mailová adresa ověřena na: jnu.ac.in
Daron M StandleyProfessor, Osaka UniversityE-mailová adresa ověřena na: biken.osaka-u.ac.jp
Michel L. TremblayGoodman Cancer Research Centre Biochemistry McGill UniversityE-mailová adresa ověřena na: mcgill.ca
Ralf JauchThe University of Hong KongE-mailová adresa ověřena na: hku.hk
Yuji SugitaRIKENE-mailová adresa ověřena na: riken.go.jp
Professor Faizan AhmadCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, New Delhi -110025, IndiaE-mailová adresa ověřena na: jmi.ac.in
Mohd Firdaus RaihUniversiti Kebangsaan MalaysiaE-mailová adresa ověřena na: mfrlab.org
Yutaro KumagaiNational Institute of Advanced Industrial Science and Technology (AIST)E-mailová adresa ověřena na: aist.go.jp
Kochetov AInstitute of Cytology and GeneticsE-mailová adresa ověřena na: bionet.nsc.ru

Sledovat

Shandar Ahmad

Professor of Bioinformatics@SCIS, Jawaharlal Nehru University, New Delhi

E-mailová adresa ověřena na: jnu.ac.in - Domovská stránka

AI/ML methods for Bioinformatics Protein-DNA structural genomics Systems level drug discovery


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information S Ahmad, MM Gromiha, A Sarai Bioinformatics 20 (4), 477-486, 2004	418	2004
PSSM-based prediction of DNA binding sites in proteins S Ahmad, A Sarai BMC bioinformatics 6 (1), 33, 2005	324	2005
ASAView: database and tool for solvent accessibility representation in proteins S Ahmad, M Gromiha, H Fawareh, A Sarai BMC bioinformatics 5 (1), 51, 2004	304	2004
Real value prediction of solvent accessibility from amino acid sequence S Ahmad, MM Gromiha, A Sarai Proteins: Structure, Function, and Bioinformatics 50 (4), 629-635, 2003	234	2003
Moments-based Prediction of DNA-binding Proteins S Ahmad, A Sarai Journal of Molecular Biology 341 (1), 65-71, 2004	165	2004
Structural analysis of cation–π interactions in DNA binding proteins MM Gromiha, C Santhosh, S Ahmad International journal of biological macromolecules 34 (3), 203-211, 2004	139	2004
NETASA: neural network based prediction of solvent accessibility S Ahmad, MM Gromiha Bioinformatics 18 (6), 819-824, 2002	136	2002
Sequence and structural features of carbohydrate binding in proteins and assessment of predictability using a neural network A Malik, S Ahmad BMC Structural Biology 7 (1), 1, 2007	118	2007
RVP-net: online prediction of real valued accessible surface area of proteins from single sequences S Ahmad, MM Gromiha, A Sarai Bioinformatics 19 (14), 1849-1851, 2003	110	2003
Partner-aware prediction of interacting residues in protein-protein complexes from sequence data S Ahmad, K Mizuguchi PLoS One 6 (12), e29104, 2011	106	2011
Protein–DNA interactions: structural, thermodynamic and clustering patterns of conserved residues in DNA-binding proteins S Ahmad, O Keskin, A Sarai, R Nussinov Nucleic acids research 36 (18), 5922-5932, 2008	103	2008
Distinct transcriptional regulatory modules underlie STAT3’s cell type-independent and cell type-specific functions AP Hutchins, D Diez, Y Takahashi, S Ahmad, R Jauch, ML Tremblay, ... Nucleic acids research 41 (4), 2155-2170, 2013	100	2013
Neural network‐based prediction of transmembrane β‐strand segments in outer membrane proteins MM Gromiha, S Ahmad, M Suwa Journal of computational chemistry 25 (5), 762-767, 2004	96	2004
A comparison of shallow and deep learning methods for predicting cognitive performance of stroke patients from MRI lesion images S Chauhan, L Vig, MDFD Grazia, M Corbetta, S Ahmad, M Zorzi Frontiers in Neuroinformatics 2019, 2019	92	2019
uORFs, reinitiation and alternative translation start sites in human mRNAs AV Kochetov, S Ahmad, V Ivanisenko, OA Volkova, NA Kolchanov, ... FEBS letters 582 (9), 1293-1297, 2008	77	2008
Design and training of a neural network for predicting the solvent accessibility of proteins S Ahmad, MM Gromiha Journal of computational chemistry 24 (11), 1313-1320, 2003	77	2003
TMBETA-NET: discrimination and prediction of membrane spanning β-strands in outer membrane proteins MM Gromiha, S Ahmad, M Suwa Nucleic acids research 33 (suppl_2), W164-W167, 2005	75	2005
Sequence-Dependent Conformational Energy of DNA Derived from Molecular Dynamics Simulations: Toward Understanding the Indirect Readout Mechanism in Protein− DNA Recognition MJ Araúzo-Bravo, S Fujii, H Kono, S Ahmad, A Sarai Journal of the American Chemical Society 127 (46), 16074-16089, 2005	65	2005
Application of residue distribution along the sequence for discriminating outer membrane proteins MM Gromiha, S Ahmad, M Suwa Computational biology and chemistry 29 (2), 135-142, 2005	61	2005
Profiles of microRNA networks in intestinal epithelial cells in a mouse model of colitis J Lee, EJ Park, Y Yuki, S Ahmad, K Mizuguchi, KJ Ishii, M Shimaoka, ... Scientific reports 5, 18174, 2015	59	2015

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