PREDICT: a method for inferring novel drug indications with application to personalized medicine A Gottlieb, GY Stein, E Ruppin, R Sharan Molecular systems biology 7 (1), 496, 2011 | 928 | 2011 |
A community effort to assess and improve drug sensitivity prediction algorithms JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ... Nature biotechnology 32 (12), 1202-1212, 2014 | 810 | 2014 |
A community computational challenge to predict the activity of pairs of compounds M Bansal, J Yang, C Karan, MP Menden, JC Costello, H Tang, G Xiao, ... Nature biotechnology 32 (12), 1213-1222, 2014 | 341 | 2014 |
INDI: a computational framework for inferring drug interactions and their associated recommendations A Gottlieb, GY Stein, Y Oron, E Ruppin, R Sharan Molecular systems biology 8 (1), 592, 2012 | 298 | 2012 |
Algorithm for data clustering in pattern recognition problems based on quantum mechanics D Horn, A Gottlieb Physical review letters 88 (1), 018702, 2001 | 276 | 2001 |
Combining drug and gene similarity measures for drug-target elucidation L Perlman, A Gottlieb, N Atias, E Ruppin, R Sharan Journal of computational biology 18 (2), 133-145, 2011 | 233 | 2011 |
Novel unsupervised feature filtering of biological data R Varshavsky, A Gottlieb, M Linial, D Horn Bioinformatics 22 (14), e507-e513, 2006 | 216 | 2006 |
Reconstruction of the mouse otocyst and early neuroblast lineage at single-cell resolution R Durruthy-Durruthy, A Gottlieb, BH Hartman, J Waldhaus, RD Laske, ... Cell 157 (4), 964-978, 2014 | 151 | 2014 |
Environmental stresses disrupt telomere length homeostasis GH Romano, Y Harari, T Yehuda, A Podhorzer, L Rubinstein, R Shamir, ... PLoS genetics 9 (9), e1003721, 2013 | 136 | 2013 |
A method for inferring medical diagnoses from patient similarities A Gottlieb, GY Stein, E Ruppin, RB Altman, R Sharan BMC medicine 11, 1-10, 2013 | 109 | 2013 |
The method of quantum clustering D Horn, A Gottlieb Advances in neural information processing systems 14, 2001 | 101 | 2001 |
Explainable drug sensitivity prediction through cancer pathway enrichment YC Tang, A Gottlieb Scientific reports 11 (1), 3128, 2021 | 56 | 2021 |
PRINCIPLE: a tool for associating genes with diseases via network propagation A Gottlieb, O Magger, I Berman, E Ruppin, R Sharan Bioinformatics 27 (23), 3325-3326, 2011 | 53 | 2011 |
Ranking adverse drug reactions with crowdsourcing A Gottlieb, R Hoehndorf, M Dumontier, RB Altman Journal of medical Internet research 17 (3), e80, 2015 | 50 | 2015 |
Human brain transcriptome analysis finds region- and subject-specific expression signatures of GABAAR subunits A Sequeira, K Shen, A Gottlieb, A Limon Communications biology 2 (1), 153, 2019 | 49 | 2019 |
SCOR: A secure international informatics infrastructure to investigate COVID-19 JL Raisaro, F Marino, J Troncoso-Pastoriza, R Beau-Lejdstrom, R Bellazzi, ... Journal of the American Medical Informatics Association 27 (11), 1721-1726, 2020 | 45 | 2020 |
Large-scale elucidation of drug response pathways in humans Y Silberberg, A Gottlieb, M Kupiec, E Ruppin, R Sharan Journal of Computational Biology 19 (2), 163-174, 2012 | 39 | 2012 |
Method and apparatus for quantum clustering D Horn, A Gottlieb, I Axel US Patent 7,653,646, 2010 | 36 | 2010 |
Unsupervised feature selection under perturbations: meeting the challenges of biological data R Varshavsky, A Gottlieb, D Horn, M Linial Bioinformatics 23 (24), 3343-3349, 2007 | 33 | 2007 |
SynPathy: Predicting drug synergy through drug-associated pathways using deep learning YC Tang, A Gottlieb Molecular Cancer Research 20 (5), 762-769, 2022 | 29 | 2022 |