Serafim Batzoglou

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Chuong B. DoE-mailová adresa ověřena na: cs.stanford.edu
Michael BrudnoProfessor of Computer Science, University of Toronto; Chief Data Scientist, UHNE-mailová adresa ověřena na: cs.toronto.edu
Michael SnyderStanford UniversityE-mailová adresa ověřena na: stanford.edu
Greg CooperFaculty Investigator, HudsonAlpha Institute for BiotechnologyE-mailová adresa ověřena na: hudsonalpha.org
Bo WangChief AI Scientist,UHN; CIFAR AI Chair, Vector Institute; Assistant Professor, U of TorontoE-mailová adresa ověřena na: vectorinstitute.ai
Eugene DavydovGoogleE-mailová adresa ověřena na: google.com
Anshul KundajeAssociate Professor, Dept. of Genetics, Dept. of Computer Science, Stanford UniversityE-mailová adresa ověřena na: stanford.edu
Sofia Kyriazopoulou PanagiotopoulouArsenalBio, Illumina, 10x Genomics, Stanford University Department of Computer ScienceE-mailová adresa ověřena na: alumni.stanford.edu
Marina SirotaProfessor, Acting Director, Bakar Computational Health Sciences Institute, UCSFE-mailová adresa ověřena na: ucsf.edu
Jason (Junjie) ZhuApple, StanfordE-mailová adresa ověřena na: stanford.edu
Victoria PopicStanford University, MITE-mailová adresa ověřena na: stanford.edu
Inna DubchakSenior Scientist, Lawrence Berkeley National Laboratory, USAE-mailová adresa ověřena na: lbl.gov
Lior PachterBren Professor of Computational Biology, CaltechE-mailová adresa ověřena na: caltech.edu
Raheleh SalariE-mailová adresa ověřena na: cs.stanford.edu
Richard M. MyersHudsonAlpha Institute for BiotechnologyE-mailová adresa ověřena na: hudsonalpha.com
Daniele RamazzottiDepartment of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyE-mailová adresa ověřena na: unimib.it
Emma PiersonUniversity of California, BerkeleyE-mailová adresa ověřena na: berkeley.edu
David GoodeLaboratory Head, Biomedicine Discovery Institute, Monash UniversityE-mailová adresa ověřena na: monash.edu
Daniel NewburgerGraduate Student in Biomedical Informatics, Stanford UniversityE-mailová adresa ověřena na: stanford.edu
Lin HuangStanford University, The Chinese University of Hong KongE-mailová adresa ověřena na: cs.stanford.edu

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Serafim Batzoglou

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E-mailová adresa ověřena na: seer.bio

Computational Genomics AI


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Initial sequencing and analysis of the human genome US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ... nature 409 (6822), 860-921, 2001	31428	2001
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	17529	2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007	6119	2007
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004	2560	2004
The ENCODE(ENCyclopedia Of DNA Elements) Project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science(Washington) 306 (5696), 636-40, 2004	2455	2004
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ... Genome research 22 (9), 1813-1831, 2012	2341	2012
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007	2308	2007
Predicting splicing from primary sequence with deep learning K Jaganathan, SK Panagiotopoulou, JF McRae, SF Darbandi, D Knowles, ... Cell 176 (3), 535-548. e24, 2019	2022	2019
Identifying a high fraction of the human genome to be under selective constraint using GERP++ EV Davydov, DL Goode, M Sirota, GM Cooper, A Sidow, S Batzoglou PLoS computational biology 6 (12), e1001025, 2010	1956	2010
Architecture of the human regulatory network derived from ENCODE data MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ... Nature 489 (7414), 91-100, 2012	1723	2012
Distribution and intensity of constraint in mammalian genomic sequence GM Cooper, EA Stone, G Asimenos, ED Green, S Batzoglou, A Sidow Genome research 15 (7), 901-913, 2005	1643	2005
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae JE Galagan, SE Calvo, C Cuomo, LJ Ma, JR Wortman, S Batzoglou, ... Nature 438 (7071), 1105-1115, 2005	1641	2005
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011	1498	2011
ProbCons: Probabilistic consistency-based multiple sequence alignment CB Do, MSP Mahabhashyam, M Brudno, S Batzoglou Genome research 15 (2), 330-340, 2005	1490	2005
LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA M Brudno, CB Do, GM Cooper, MF Kim, E Davydov, ED Green, A Sidow, ... Genome research 13 (4), 721-731, 2003	1385	2003
Linking disease associations with regulatory information in the human genome MA Schaub, AP Boyle, A Kundaje, S Batzoglou, M Snyder Genome research 22 (9), 1748-1759, 2012	915	2012
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data A Valouev, DS Johnson, A Sundquist, C Medina, E Anton, S Batzoglou, ... Nature methods 5 (9), 829-834, 2008	905	2008
What is the expectation maximization algorithm? CB Do, S Batzoglou Nature biotechnology 26 (8), 897-899, 2008	815	2008
ARACHNE: a whole-genome shotgun assembler S Batzoglou, DB Jaffe, K Stanley, J Butler, S Gnerre, E Mauceli, B Berger, ... Genome research 12 (1), 177-189, 2002	795	2002
CONTRAfold: RNA secondary structure prediction without physics-based models CB Do, DA Woods, S Batzoglou Bioinformatics 22 (14), e90-e98, 2006	742	2006

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