Alexander Predeus

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Yury BarbitoffGroup Leader, Institute of Bioinformatics Research and Education, Belgrade, SerbiaE-mailová adresa ověřena na: bioinf.institute
Jay HintonProfessor of Microbial Pathogenesis, University of LiverpoolE-mailová adresa ověřena na: liv.ac.uk
Michael FeigMichigan State UniversityE-mailová adresa ověřena na: msu.edu
Blanca M. Perez-SepulvedaUniversity of LiverpoolE-mailová adresa ověřena na: liverpool.ac.uk
Maxim ArtyomovWashington University in St.LouisE-mailová adresa ověřena na: wustl.edu
Nicholas FeaseyProfessor, Liverpool School of Tropical MedicineE-mailová adresa ověřena na: lstmed.ac.uk
Neil HallThe Earlham InstituteE-mailová adresa ověřena na: earlham.ac.uk
Karsten HokampBioinformatics Research Officer, Smurfit Institute of Genetics, Trinity College DublinE-mailová adresa ověřena na: tcd.ie
Melita A GordonProfessor of Gastroenterology, University of LiverpolE-mailová adresa ověřena na: liv.ac.uk
Monika SharmaPlaksha UniversityE-mailová adresa ověřena na: plaksha.edu.in
Srinivasa Murthy GopalRuhr Universität Bochum, GermanyE-mailová adresa ověřena na: rub.de
Rocío Canals Alvarez, PhDGSK Vaccines Institute for Global HealthE-mailová adresa ověřena na: gsk.com
Nicolas WennerPostdoctoral researcher, Biozentrum, University of BaselE-mailová adresa ověřena na: unibas.ch
Rostislav K SkitchenkoE-mailová adresa ověřena na: itmo.ru
Anton ShikovJunior research felow at All-Russian Research Institute for Agricultural MicrobiologyE-mailová adresa ověřena na: arriam.ru
Will RoweCFDXE-mailová adresa ověřena na: bham.ac.uk
Christian SchudomaSenior Bioinformatics Software EngineerE-mailová adresa ověřena na: embl.de
Yue HuangWashington University in St. LouisE-mailová adresa ověřena na: wustl.edu
Sviatoslav SidorovPostdoctoral Research Scientist, MRC London Institute of Medical SciencesE-mailová adresa ověřena na: lms.mrc.ac.uk
Irina ShchukinaPostdoc, Washington University in St. LouisE-mailová adresa ověřena na: wustl.edu

Sledovat

Alexander Predeus

Principal bioinformatician at Wellcome Sanger Institute

E-mailová adresa ověřena na: sanger.ac.uk - Domovská stránka

bioinformatics systems biology next-generation sequencing


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Caloric restriction in humans reveals immunometabolic regulators of health span O Spadaro, Y Youm, I Shchukina, S Ryu, S Sidorov, A Ravussin, ... Science 375 (6581), 671-677, 2022	209	2022
Systematic dissection of biases in whole-exome and whole-genome sequencing reveals major determinants of coding sequence coverage YA Barbitoff, DE Polev, AS Glotov, EA Serebryakova, IV Shcherbakova, ... Scientific Reports 10 (1), 2057, 2020	130	2020
Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa CV Pulford, BM Perez-Sepulveda, R Canals, JA Bevington, RJ Bengtsson, ... Nature microbiology 6 (3), 327-338, 2021	108	2021
Diels−Alder Reaction−Aromatization Approach toward Functionalized Ring C Allocolchicinoids. Enantioselective Total Synthesis of (−)-7S-Allocolchicine AV Vorogushin, AV Predeus, WD Wulff, HJ Hansen The Journal of Organic Chemistry 68 (15), 5826-5831, 2003	107	2003
PRIMO: a transferable coarse-grained force field for proteins P Kar, SM Gopal, YM Cheng, A Predeus, M Feig Journal of chemical theory and computation 9 (8), 3769-3788, 2013	105	2013
Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580 R Canals, DL Hammarlöf, C Kröger, SV Owen, WY Fong, ... PLoS biology 17 (1), e3000059, 2019	75	2019
Regulation of orthogonal functions in a dual catalyst system. Subservient role of a nonchiral Lewis acid in an asymmetric catalytic heteroatom Diels− Alder reaction CA Newman, JC Antilla, P Chen, AV Predeus, L Fielding, WD Wulff Journal of the American Chemical Society 129 (23), 7216-7217, 2007	75	2007
CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data CZI Cell Science Program, S Abdulla, B Aevermann, P Assis, S Badajoz, ... Nucleic Acids Research, gkae1142, 2024	73	2024
Systematic benchmark of state-of-the-art variant calling pipelines identifies major factors affecting accuracy of coding sequence variant discovery YA Barbitoff, R Abasov, VE Tvorogova, AS Glotov, AV Predeus BMC genomics 23 (1), 1-17, 2022	64	2022
Conformational sampling of peptides in the presence of protein crowders from AA/CG-multiscale simulations AV Predeus, S Gul, SM Gopal, M Feig The Journal of Physical Chemistry B 116 (29), 8610-8620, 2012	63	2012
Unifying model for molecular determinants of the preselection Vβ repertoire S Gopalakrishnan, K Majumder, A Predeus, Y Huang, OI Koues, ... Proceedings of the National Academy of Sciences 110 (34), E3206-E3215, 2013	62	2013
DNA bending propensity in the presence of base mismatches: implications for DNA repair M Sharma, AV Predeus, S Mukherjee, M Feig The Journal of Physical Chemistry B 117 (20), 6194-6205, 2013	58	2013
Effect of gene-lifestyle interaction on gestational diabetes risk PV Popova, AA Klyushina, LB Vasilyeva, AS Tkachuk, YA Bolotko, ... Oncotarget 8 (67), 112024, 2017	55	2017
An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes BM Perez-Sepulveda, D Heavens, CV Pulford, AV Predeus, R Low, ... Genome biology 22, 1-18, 2021	52	2021
Intracellular niche-specific profiling reveals transcriptional adaptations required for the cytosolic lifestyle of Salmonella enterica TSR Powers, AL Haeberle, AV Predeus, DL Hammarlöf, JA Cundiff, ... PLoS pathogens 17 (8), e1009280, 2021	49	2021
Optically active calixarenes conduced by methylene substitution V Gopalsamuthiram, AV Predeus, RH Huang, WD Wulff Journal of the American Chemical Society 131 (50), 18018-18019, 2009	47	2009
Energetic and structural details of the trigger-loop closing transition in RNA polymerase II B Wang, AV Predeus, ZF Burton, M Feig Biophysical journal 105 (3), 767-775, 2013	42	2013
Expanding the Russian allele frequency reference via cross-laboratory data integration: insights from 7,452 exome samples YA Barbitoff, DN Khmelkova, EA Pomerantseva, AV Slepchenkov, ... National Science Review, nwae326, 2024	39	2024
Whole‑exome sequencing in Russian children with non‑type 1 diabetes mellitus reveals a wide spectrum of genetic variants in MODY‑related and unrelated genes OS Glotov, EA Serebryakova, ME Turkunova, OA Efimova, AS Glotov, ... Molecular Medicine Reports, 2019	38	2019
Identification of novel candidate markers of type 2 diabetes and obesity in Russia by exome sequencing with a limited sample size YA Barbitoff, EA Serebryakova, YA Nasykhova, AV Predeus, DE Polev, ... Genes 9 (8), 415, 2018	38	2018

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