Jeremy Leipzig

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Frederic BushmanE-mailová adresa ověřena na: mail.med.upenn.edu
Christian HoffmannUniversity of Sao PauloE-mailová adresa ověřena na: usp.br
Joseph R. EckerHoward Hughes Medical Institute and The Salk Institute for Biological StudiesE-mailová adresa ověřena na: Salk.edu
Charles C BerryUC San Diego, Professor EmeritusE-mailová adresa ověřena na: ucsd.edu
Jeffrey LiebermanProfessor of Psychiatry Columbia UniversityE-mailová adresa ověřena na: columbia.edu
Sridhar HannenhalliSenior Investigator, Cancer Data Science Lab, National Cancer Institute. NIHE-mailová adresa ověřena na: nih.gov
Stephen D. Barr, Ph.DAssociate Professor, Western University, Dept. Microbiology & Immunology, London, Ontario CanadaE-mailová adresa ověřena na: uwo.ca
Richard MailmanUniversity Distinguished Professor and College of Medicine Distinguished Senior ScholarE-mailová adresa ověřena na: psu.edu
Pablo TebasUniversity of PennsylvaniaE-mailová adresa ověřena na: uphs.upenn.edu
Steffen HeberNorth Carolina State UniversityE-mailová adresa ověřena na: ncsu.edu
Michael EmermanFred Hutchinson Cancer Research CenterE-mailová adresa ověřena na: fredhutch.org
Lishuang ShenClinical Staff Scientist, Center for Personalized Medicine, Children's Hospital Los AngelesE-mailová adresa ověřena na: chla.usc.edu
Daniel Navarro-GomezOcular Genomics Institute, Massachusetts Eye and Ear Infirmary, Harvard Medical School, BostonE-mailová adresa ověřena na: meei.harvard.edu
Marni J. FalkDepartment of Pediatrics, The Children's Hospital of Philadelphia, University of PennsylvaniaE-mailová adresa ověřena na: email.chop.edu
Graham P TaylorProfessor of Human Retrovirology, Imperial College LondonE-mailová adresa ověřena na: imperial.ac.uk
Karthik RamUniversity of California, BerkeleyE-mailová adresa ověřena na: berkeley.edu
Charles Tapley HoytE-mailová adresa ověřena na: northeastern.edu
Israel BarrantesRostock University Medical Center, GermanyE-mailová adresa ověřena na: uni-rostock.de
Zhe ZhangUniversity of Pennsylvania
Dimitra ChalkiaVP Computational Biology, Athos Therapeutics

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Jeremy Leipzig

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E-mailová adresa ověřena na: tiledb.com

Bioinformatics Workflows Reproducible Research Metadata Genomics


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
De novo mutations in histone-modifying genes in congenital heart disease S Zaidi, M Choi, H Wakimoto, L Ma, J Jiang, JD Overton, ... Nature 498 (7453), 220-223, 2013	1008	2013
A role for LEDGF/p75 in targeting HIV DNA integration A Ciuffi, M Llano, E Poeschla, C Hoffmann, J Leipzig, P Shinn, JR Ecker, ... Nature medicine 11 (12), 1287-1289, 2005	849	2005
mtDNA variation and analysis using mitomap and mitomaster MT Lott, JN Leipzig, O Derbeneva, HM Xie, D Chalkia, M Sarmady, ... Current protocols in bioinformatics 44 (1), 1.23. 1-1.23. 26, 2013	623	2013
HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications GP Wang, A Ciuffi, J Leipzig, CC Berry, FD Bushman Genome research 17 (8), 1186-1194, 2007	572	2007
Genome-wide analysis of retroviral DNA integration F Bushman, M Lewinski, A Ciuffi, S Barr, J Leipzig, S Hannenhalli, ... Nature reviews microbiology 3 (11), 848-858, 2005	546	2005
Retroviral DNA integration: viral and cellular determinants of target-site selection MK Lewinski, M Yamashita, M Emerman, A Ciuffi, H Marshall, G Crawford, ... PLoS pathogens 2 (6), e60, 2006	484	2006
A review of bioinformatic pipeline frameworks J Leipzig Briefings in bioinformatics 18 (3), 530-536, 2017	358	2017
DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations C Hoffmann, N Minkah, J Leipzig, G Wang, MQ Arens, P Tebas, ... Nucleic acids research 35 (13), e91, 2007	290	2007
Increased frequency of de novo copy number variants in congenital heart disease by integrative analysis of single nucleotide polymorphism array and exome sequence data JT Glessner, AG Bick, K Ito, JG Homsy, L Rodriguez-Murillo, M Fromer, ... Circulation research 115 (10), 884-896, 2014	284	2014
Selection of target sites for mobile DNA integration in the human genome C Berry, S Hannenhalli, J Leipzig, FD Bushman PLoS computational biology 2 (11), e157, 2006	258	2006
Comparison of brain metabolic activity patterns induced by ketamine, MK-801 and amphetamine in rats: support for NMDA receptor involvement in responses to subanesthetic dose of … GE Duncan, S Miyamoto, JN Leipzig, JA Lieberman Brain research 843 (1-2), 171-183, 1999	138	1999
Differential effects of clozapine and haloperidol on ketamine-induced brain metabolic activation GE Duncan, JN Leipzig, RB Mailman, JA Lieberman Brain research 812 (1-2), 65-75, 1998	138	1998
DNA bar coding and pyrosequencing to analyze adverse events in therapeutic gene transfer GP Wang, A Garrigue, A Ciuffi, K Ronen, J Leipzig, C Berry, ... Nucleic acids research 36 (9), e49-e49, 2008	129	2008
Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP S Sonney, J Leipzig, MT Lott, S Zhang, V Procaccio, DC Wallace, ... PLoS computational biology 13 (12), e1005867, 2017	125	2017
HTLV-1 integration into transcriptionally active genomic regions is associated with proviral expression and with HAM/TSP KN Meekings, J Leipzig, FD Bushman, GP Taylor, CRM Bangham PLoS pathogens 4 (3), e1000027, 2008	124	2008
HIV integration site selection: targeting in macrophages and the effects of different routes of viral entry SD Barr, A Ciuffi, J Leipzig, P Shinn, JR Ecker, FD Bushman Molecular Therapy 14 (2), 218-225, 2006	124	2006
The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome J Leipzig, P Pevzner, S Heber Nucleic Acids Research 32 (13), 3977-3983, 2004	121	2004
Effects of ketamine, MK-801, and amphetamine on regional brain 2-deoxyglucose uptake in freely moving mice S Miyamoto, JN Leipzig, JA Lieberman, GE Duncan Neuropsychopharmacology 22 (4), 400-412, 2000	119	2000
Comparison of the effects of clozapine, risperidone, and olanzapine on ketamine-induced alterations in regional brain metabolism GE Duncan, S Miyamoto, JN Leipzig, JA Lieberman The Journal of Pharmacology and Experimental Therapeutics 293 (1), 8-14, 2000	111	2000
The role of metadata in reproducible computational research J Leipzig, D Nüst, CT Hoyt, K Ram, J Greenberg Patterns 2 (9), 2021	103	2021

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