Manuel Holtgrewe

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Dieter BeuleBerlin Institute of Health, CharitéE-mailová adresa ověřena na: bih-charite.de
Stefan MundlosInstitut für Medizinische Genetik und Humangenetik, CharitéE-mailová adresa ověřena na: molgen.mpg.de
Christopher Tomkins-TinchBroad Institute of MIT and HarvardE-mailová adresa ověřena na: g.harvard.edu
Björn Fischer-ZirnsakPostDoc, Charité Universitätsmedizin BerlinE-mailová adresa ověřena na: charite.de
Johannes KösterUniversity of Duisburg-EssenE-mailová adresa ověřena na: uni-due.de
Kim Philipp JablonskiETH ZuerichE-mailová adresa ověřena na: bsse.ethz.ch
Alexander KanitzBiozentrum, University of BaselE-mailová adresa ověřena na: unibas.ch
Sven O. TwardziokCharite Universitätsmedizin Berlin - BIHE-mailová adresa ověřena na: charite.de
Malte SpielmannInstitute of Human Genetics, University of Lübeck & Kiel UniversityE-mailová adresa ověřena na: uw.edu
Uwe KornakUniversitaetsmedizin GöttingenE-mailová adresa ověřena na: med.uni-goettingen.de
Knut ReinertFU Berlin / MPI MolgenE-mailová adresa ověřena na: fu-berlin.de
Felix MölderAlgorithms for reproducible bioinformatics, Institute of Human Genetics, University of DuisburgE-mailová adresa ověřena na: uni-due.de
Prof. Dr. Sven NahnsenProfessor for Biomedical Data ScienceE-mailová adresa ověřena na: qbic.uni-tuebingen.de
Brice LetcherLBMC, ENS de Lyon & CNRSE-mailová adresa ověřena na: ens-lyon.fr
Andreas WilmImmunoScapeE-mailová adresa ověřena na: immunoscape.com
Michael B. HallUniversity of MelbourneE-mailová adresa ověřena na: unimelb.edu.au
David WeeseD4L data4life gGmbHE-mailová adresa ověřena na: data4life.care
Peter RobinsonBerlin Institute of Health, Charité - Universitätsmedizin, Berlin, GermanyE-mailová adresa ověřena na: bih-charite.de
Marten JägerInstitut für Medizinische Genetik und Humangenetik Charite Berlin - Bioinformatic core facilityE-mailová adresa ověřena na: charite.de
Vanessa SochatLawrence Livermore National LaboratoryE-mailová adresa ověřena na: llnl.gov

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Manuel Holtgrewe

Limbach Genetics / Medizinische Genetik Mainz

E-mailová adresa ověřena na: medgen-mainz.de

Bioinformatics Computational Biology Genomics Scientific Data Management


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
Sustainable data analysis with Snakemake F Mölder, KP Jablonski, B Letcher, MB Hall, CH Tomkins-Tinch, V Sochat, ... F1000Research 10, 2021	1303	2021
Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018	1238	2018
Next-generation diagnostics and disease-gene discovery with the Exomiser D Smedley, JOB Jacobsen, M Jäger, S Köhler, M Holtgrewe, M Schubach, ... Nature protocols 10 (12), 2004-2015, 2015	392	2015
Mason–a read simulator for second generation sequencing data M Holtgrewe Technical Report FU Berlin, 2010	280	2010
RazerS 3: faster, fully sensitive read mapping D Weese, M Holtgrewe, K Reinert Bioinformatics 28 (20), 2592-2599, 2012	195	2012
Engineering a scalable high quality graph partitioner M Holtgrewe, P Sanders, C Schulz 2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010	148	2010
Hi-C identifies complex genomic rearrangements and TAD-shuffling in developmental diseases US Melo, R Schöpflin, R Acuna-Hidalgo, MA Mensah, B Fischer-Zirnsak, ... The American Journal of Human Genetics 106 (6), 872-884, 2020	123	2020
A novel and well-defined benchmarking method for second generation read mapping M Holtgrewe, AK Emde, D Weese, K Reinert BMC bioinformatics 12, 1-10, 2011	104	2011
Fiona: a parallel and automatic strategy for read error correction MH Schulz, D Weese, M Holtgrewe, V Dimitrova, S Niu, K Reinert, ... Bioinformatics 30 (17), i356-i363, 2014	97	2014
Increased risk of severe clinical course of COVID-19 in carriers of HLA-C* 04: 01 J Weiner, P Suwalski, M Holtgrewe, A Rakitko, C Thibeault, M Mueller, ... EClinicalMedicine 40, 2021	90	2021
Interpretable clinical genomics with a likelihood ratio paradigm PN Robinson, V Ravanmehr, JOB Jacobsen, D Danis, XA Zhang, ... The American Journal of Human Genetics 107 (3), 403-417, 2020	88	2020
Pathogenic variants in USP7 cause a neurodevelopmental disorder with speech delays, altered behavior, and neurologic anomalies MD Fountain, DS Oleson, ME Rech, L Segebrecht, JV Hunter, ... Genetics in medicine 21 (8), 1797-1807, 2019	61	2019
VarFish: comprehensive DNA variant analysis for diagnostics and research M Holtgrewe, O Stolpe, M Nieminen, S Mundlos, A Knaus, U Kornak, ... Nucleic acids research 48 (W1), W162-W169, 2020	60	2020
Genome alignment with graph data structures: a comparison B Kehr, K Trappe, M Holtgrewe, K Reinert BMC bioinformatics 15, 1-20, 2014	56	2014
Pathogenic variants associated with dilated cardiomyopathy predict outcome in pediatric myocarditis F Seidel, M Holtgrewe, N Al-Wakeel-Marquard, B Opgen-Rhein, J Dartsch, ... Circulation: Genomic and Precision Medicine 14 (4), e003250, 2021	50	2021
Combining callers improves the detection of copy number variants from whole-genome sequencing M Coutelier, M Holtgrewe, M Jäger, R Flöttman, MA Mensah, ... European Journal of Human Genetics 30 (2), 178-186, 2022	41	2022
Variants in the SK2 channel gene (KCNN2) lead to dominant neurodevelopmental movement disorders F Mochel, A Rastetter, B Ceulemans, K Platzer, S Yang, DN Shinde, ... Brain 143 (12), 3564-3573, 2020	36	2020
Targeted panel sequencing in pediatric primary cardiomyopathy supports a critical role of TNNI3 J Kühnisch, C Herbst, N Al‐Wakeel‐Marquard, J Dartsch, M Holtgrewe, ... Clinical genetics 96 (6), 549-559, 2019	36	2019
Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes R Schöpflin, US Melo, H Moeinzadeh, D Heller, V Laupert, J Hertzberg, ... Nature Communications 13 (1), 6470, 2022	35	2022
Multisite de novo mutations in human offspring after paternal exposure to ionizing radiation M Holtgrewe, A Knaus, G Hildebrand, JT Pantel, MR Santos, K Neveling, ... Scientific reports 8 (1), 14611, 2018	32	2018

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