Sledovat
Dénes Türei
Dénes Türei
Heidelberg University, EMBL Heidelberg
E-mailová adresa ověřena na: embl.de - Domovská stránka
Název
Citace
Citace
Rok
Benchmark and integration of resources for the estimation of human transcription factor activities
L Garcia-Alonso, CH Holland, MM Ibrahim, D Turei, J Saez-Rodriguez
Genome research 29 (8), 1363-1375, 2019
8302019
OmniPath: guidelines and gateway for literature-curated signaling pathway resources
D Türei, T Korcsmáros, J Saez-Rodriguez
Nature methods 13 (12), 966-967, 2016
5802016
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
D Dimitrov, D Türei, M Garrido-Rodriguez, PL Burmedi, JS Nagai, C Boys, ...
Nature communications 13 (1), 3224, 2022
334*2022
Integrated intra‐and intercellular signaling knowledge for multicellular omics analysis
D Türei, A Valdeolivas, L Gul, N Palacio‐Escat, M Klein, O Ivanova, ...
Molecular systems biology 17 (3), e9923, 2021
2572021
SignaLink 2–a signaling pathway resource with multi-layered regulatory networks
D Fazekas, M Koltai, D Türei, D Módos, M Pálfy, Z Dúl, L Zsákai, ...
BMC systems biology 7, 1-15, 2013
2312013
Adipocyte-secreted BMP8b mediates adrenergic-induced remodeling of the neuro-vascular network in adipose tissue
V Pellegrinelli, VJ Peirce, L Howard, S Virtue, D Türei, M Senzacqua, ...
Nature Communications 9 (1), 4974, 2018
1442018
The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops
D Papp, K Lenti, D Módos, D Fazekas, Z Dúl, D Türei, L Földvári-Nagy, ...
FEBS letters 586 (13), 1795-1802, 2012
1342012
Complex regulation of autophagy in cancer–Integrated approaches to discover the networks that hold a double-edged sword
J Kubisch, D Türei, L Földvári-Nagy, ZA Dunai, L Zsákai, M Varga, T Vellai, ...
Seminars in cancer biology 23 (4), 252-261, 2013
1222013
The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling
A Chiapparino, K Maeda, D Turei, J Saez-Rodriguez, AC Gavin
Progress in lipid research 61, 30-39, 2016
1172016
Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities
S Müller-Dott, E Tsirvouli, M Vazquez, RO Ramirez Flores, ...
Nucleic acids research 51 (20), 10934-10949, 2023
1142023
Autophagy Regulatory Network—A systems-level bioinformatics resource for studying the mechanism and regulation of autophagy
D Türei, L Földvári-Nagy, D Fazekas, D Módos, J Kubisch, T Kadlecsik, ...
Autophagy 11 (1), 155-165, 2015
1022015
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
952021
NRF2‐ome: An Integrated Web Resource to Discover Protein Interaction and Regulatory Networks of NRF2
D Türei, D Papp, D Fazekas, L Földvári-Nagy, D Módos, K Lenti, ...
Oxidative medicine and cellular longevity 2013 (1), 737591, 2013
542013
Democratizing knowledge representation with BioCypher
S Lobentanzer, P Aloy, J Baumbach, B Bohar, VJ Carey, P Charoentong, ...
Nature Biotechnology 41 (8), 1056-1059, 2023
452023
Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer
J Tang, P Gautam, A Gupta, L He, S Timonen, Y Akimov, W Wang, ...
NPJ systems biology and applications 5 (1), 20, 2019
39*2019
Bringing data from curated pathway resources to Cytoscape with OmniPath
F Ceccarelli, D Turei, A Gabor, J Saez-Rodriguez
Bioinformatics 36 (8), 2632-2633, 2020
372020
SignaLink3: a multi-layered resource to uncover tissue-specific signaling networks
L Csabai, D Fazekas, T Kadlecsik, M Szalay-Bekő, B Bohár, M Madgwick, ...
Nucleic acids research 50 (D1), D701-D709, 2022
352022
Long-term dynamic patterns and diversity of phytoplankton communities in a large eutrophic river (the case of River Danube, Hungary)
L Hufnagel, KT Kiss, C Sipkay, L Gimesi, C Vadadi Fülöp, D Türei
Applied Ecology and Environmental Research 8 (4), 329-349, 2010
352010
Weed species composition of small‐scale farmlands bears a strong crop‐related and environmental signature
K Nagy, A Lengyel, A Kovács, D Türei, AM Csergő, G Pinke
Weed Research 58 (1), 46-56, 2018
302018
Targets of drugs are generally and targets of drugs having side effects are specifically good spreaders of human interactome perturbations
ÁR Perez-Lopez, KZ Szalay, D Türei, D Módos, K Lenti, T Korcsmáros, ...
Scientific reports 5 (1), 10182, 2015
302015
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Články 1–20