| A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis AL Bauer, TL Jackson, Y Jiang Biophysical journal 92 (9), 3105-3121, 2007 | 362 | 2007 |
| Agent-based modeling of host–pathogen systems: The successes and challenges AL Bauer, CAA Beauchemin, AS Perelson Information sciences 179 (10), 1379-1389, 2009 | 281 | 2009 |
| Topography of extracellular matrix mediates vascular morphogenesis and migration speeds in angiogenesis AL Bauer, TL Jackson, Y Jiang PLoS computational biology 5 (7), e1000445, 2009 | 268 | 2009 |
| Calcium signaling stimulates translation of HIF‐α during hypoxia AS Hui, AL Bauer, JB Striet, PO Schnell, MF Czyzyk‐Krzeska The FASEB journal 20 (3), 466-475, 2006 | 152 | 2006 |
| Receptor cross-talk in angiogenesis: mapping environmental cues to cell phenotype using a stochastic, Boolean signaling network model AL Bauer, TL Jackson, Y Jiang, T Rohlf Journal of theoretical biology 264 (3), 838-846, 2010 | 86 | 2010 |
| A comparative study of collagen matrix density effect on endothelial sprout formation using experimental and computational approaches A Shamloo, N Mohammadaliha, SC Heilshorn, AL Bauer Annals of biomedical engineering 44, 929-941, 2016 | 68 | 2016 |
| The internal consistency, stability, and accuracy of the discrete, compatible formulation of Lagrangian hydrodynamics AL Bauer, DE Burton, EJ Caramana, R Loubère, MJ Shashkov, ... Journal of Computational Physics 218 (2), 572-593, 2006 | 55 | 2006 |
| Using sequence-specific chemical and structural properties of DNA to predict transcription factor binding sites AL Bauer, WS Hlavacek, PJ Unkefer, F Mu PLoS computational biology 6 (11), e1001007, 2010 | 45 | 2010 |
| Dynamics of intrapulmonary bacterial growth in a murine model of repeated microaspiration I Ben-David, SE Price, DM Bortz, CF Greineder, SE Cohen, AL Bauer, ... American journal of respiratory cell and molecular biology 33 (5), 476-482, 2005 | 42 | 2005 |
| Regulation of gene expression for neurotransmitters during adaptation to hypoxia in oxygen‐sensitive neuroendocrine cells WR Paulding, PO Schnell, AL Bauer, JB Striet, JA Nash, AV Kuznetsova, ... Microscopy research and technique 59 (3), 178-187, 2002 | 42 | 2002 |
| The effects of HIV-1 infection on latent tuberculosis AL Bauer, IB Hogue, S Marino, DE Kirschner Mathematical Modelling of Natural Phenomena 3 (7), 229-266, 2008 | 39 | 2008 |
| Binding of nucleoid-associated protein Fis to DNA is regulated by DNA breathing dynamics K Nowak-Lovato, LB Alexandrov, A Banisadr, AL Bauer, AR Bishop, ... PLoS Computational Biology 9 (1), e1002881, 2013 | 36 | 2013 |
| Integrative physical oncology H Hatzikirou, A Chauviere, AL Bauer, A Leier, MT Lewis, P Macklin, ... Wiley Interdisciplinary Reviews: Systems Biology and Medicine 4 (1), 1-14, 2012 | 33 | 2012 |
| On stability of staggered schemes AL Bauer, R Loubere, B Wendroff SIAM Journal on Numerical Analysis 46 (2), 996-1011, 2008 | 14 | 2008 |
| Investigating the role of cross-talk between chemical and stromal factors in endothelial cell phenotype determination AL Bauer, T Rohlf Modeling Tumor Vasculature: Molecular, Cellular, and Tissue Level Aspects …, 2012 | 10 | 2012 |
| Multiphenomenology explosion monitoring (MultiPEM): A general framework for data interpretation and yield estimation BJ Williams, WP Brug, EM Casleton, EM Syracuse, PS Blom, ... Geophysical Journal International 226 (1), 14-32, 2021 | 4 | 2021 |
| A Multi-Scale Cell-Based Model to Simulate and Elucidate the Mechanisms Controlling Tumor-Induced Angiogenesis. AL Bauer | 4 | 2007 |
| Nightshade Prototype Experiments (Silverleaf) J Danielson, AL Bauer Los Alamos National Lab.(LANL), Los Alamos, NM (United States), 2016 | 2 | 2016 |
| Cell-based models of tumor angiogenesis Y Jiang, AL Bauer, TL Jackson Modeling Tumor Vasculature: Molecular, Cellular, and Tissue Level Aspects …, 2012 | 2 | 2012 |
| Silverleaf: An Experimental Series in Support of Nightshade J Danielson, AL Bauer Los Alamos National Lab.(LANL), Los Alamos, NM (United States), 2016 | 1 | 2016 |
