| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 94 | 2021 |
| De novo transcriptome sequencing reveals important molecular networks and metabolic pathways of the plant, Chlorophytum borivilianum S Kalra, BL Puniya, D Kulshreshtha, S Kumar, J Kaur, S Ramachandran, ... PLoS One 8 (12), e83336, 2013 | 88 | 2013 |
| T2DiACoD: A Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders J Rani, I Mittal, A Pramanik, N Singh, N Dube, S Sharma, BL Puniya, ... Scientific Reports 7, 2017 | 61 | 2017 |
| A Mechanistic Computational Model Reveals That Plasticity of CD4+ T Cell Differentiation Is a Function of Cytokine Composition and Dosage BL Puniya, RG Todd, A Mohammed, DM Brown, M Barberis, T Helikar Frontiers in Physiology 9, 878, 2018 | 45 | 2018 |
| Identification of novel adhesins of M. tuberculosis H37Rv using integrated approach of multiple computational algorithms and experimental analysis S Kumar, BL Puniya, S Parween, P Nahar, S Ramachandran PLoS One 8 (7), e69790, 2013 | 43 | 2013 |
| Integrative computational approach identifies drug targets in CD4+ T-cell-mediated immune disorders BL Puniya, R Amin, B Lichter, R Moore, A Ciurej, SJ Bennett, M Barberis, ... npj Systems Biology and Applications 7 (1), 1-18, 2021 | 29 | 2021 |
| A multi-approach and multi-scale platform to model CD4+ T cells responding to infections KY Wertheim, BL Puniya, A La Fleur, AR Shah, M Barberis, T Helikar PloS Computational Biology 17 (8), e1009209, 2021 | 22* | 2021 |
| Systems Perturbation Analysis of a Large-Scale Signal Transduction Model Reveals Potentially Influential Candidates for Cancer Therapeutics BL Puniya, L Allen, C Hochfelder, M Majumder, T Helikar Frontiers in Bioengineering and Biotechnology 4, 2016 | 22 | 2016 |
| Integrated gene co-expression network analysis in the growth phase of Mycobacterium tuberculosis reveals new potential drug targets BL Puniya, D Kulshreshtha, SP Verma, S Kumar, S Ramachandran Molecular BioSystems 9 (11), 2798-2815, 2013 | 22 | 2013 |
| Essential role of systemic iron mobilization and redistribution for adaptive thermogenesis through HIF2-α/hepcidin axis JS Yook, M You, J Kim, AM Toney, R Fan, BL Puniya, T Helikar, S Vaulont, ... Proceedings of the National Academy of Sciences 118 (40), e2109186118, 2021 | 16 | 2021 |
| An in silico, structural, and biological analysis of lactoferrin of different mammals DS Vieira, RC Polveiro, TJ Butler, TA Hackett, CP Braga, BL Puniya, ... International Journal of Biological Macromolecules 187, 119-126, 2021 | 11 | 2021 |
| Combined TLR4 and TLR9 agonists induce distinct phenotypic changes in innate immunity in vitro and in vivo AT Lampe, BL Puniya, AK Pannier, T Helikar, DM Brown Cellular immunology 355, 104149, 2020 | 11 | 2020 |
| Identification of biologically essential nodes via determinative power in logical models of cellular processes T Pentzien, BL Puniya, T Helikar, MT Matache Frontiers in Physiology 9, 1185, 2018 | 10 | 2018 |
| Integration of Metabolic Modeling with Gene Co-expression Reveals Transcriptionally Programmed Reactions Explaining Robustness in Mycobacterium tuberculosis BL Puniya, D Kulshreshtha, I Mittal, A Mobeen, S Ramachandran Scientific reports 6 (1), 23440, 2016 | 9 | 2016 |
| Structural and binding studies of SAP‐1 protein with heparin VK Yadav, RS Mandal, BL Puniya, R Kumar, S Dey, S Singh, S Yadav Chemical biology & drug design 85 (3), 404-410, 2015 | 9 | 2015 |
| Isolation and characterization of endophytes from different plants: effects on growth of Pennisetum typhoides P Gupta, B Puniya, S Barun, M Asthana, A Kumar Biosci. Biotechnol. Res. Asia 11 (1), 223-34, 2014 | 9 | 2014 |
| A multiscale mechanistic model of human dendritic cells for in-silico investigation of immune responses and novel therapeutics discovery SS Aghamiri, BL Puniya, R Amin, T Helikar Frontiers in Immunology 14, 1112985, 2023 | 8 | 2023 |
| Integrative network analyses of transcriptomics data reveal potential drug targets for acute radiation syndrome R Moore, BL Puniya, R Powers, C Guda, KW Bayles, DB Berkowitz, ... Scientific reports 11 (1), 5585, 2021 | 7* | 2021 |
| Perspectives on computational modeling of biological systems and the significance of the SysMod community BL Puniya, M Verma, C Damiani, S Bakr, A Dräger Bioinformatics Advances 4 (1), vbae090, 2024 | 6 | 2024 |
| Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... Frontiers in Immunology 14, 1282859, 2024 | 5 | 2024 |
Tomas HelikarEberhard Professor, Department of Biochemistry, University of Nebraska - LincolnE-mailová adresa ověřena na: unl.edu