Mark T. Holder

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Paul O. LewisProfessor of Ecology and Evolutionary Biology, University of ConnecticutVerificeret mail på uconn.edu
Jeet SukumaranAssistant Professor, Dept. of Biology, San Diego State UniversityVerificeret mail på sdsu.edu
David SwoffordVisiting Scientist, Florida Museum of Natural HistoryVerificeret mail på duke.edu
John P. HuelsenbeckUniversity of California, BerkeleyVerificeret mail på berkeley.edu
alan e gelfandProfessor of Statistical Science Duke UniversityVerificeret mail på stat.duke.edu
Marc A. SuchardProfessor, University of California, Los AngelesVerificeret mail på ucla.edu
tony rebeloScientist, South African National Biodiversity InstituteVerificeret mail på sanbi.org.za
John SilanderProfessor of Ecology and Evolutionary Biology, University of ConnecticutVerificeret mail på uconn.edu
Emily Jane McTavishUniversity of California, MercedVerificeret mail på ucmerced.edu
David M. HillisProfessor of Integrative Biology, University of Texas at AustinVerificeret mail på austin.utexas.edu
Aaron DarlingIndependentVerificeret mail på illumina.com
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerificeret mail på ed.ac.uk
Peter BeerliDepartment of Scientific Computing, Florida State UniversityVerificeret mail på fsu.edu
Michael P. CummingsCenter for Bioinformatics and Computational Biology, University of MarylandVerificeret mail på umd.edu
Daniel L. AyresUniversity of MarylandVerificeret mail på umd.edu
Fredrik RonquistProfessor, Swedish Museum of Natural History, Dept. Bioinformatics and GeneticsVerificeret mail på nrm.se
Andrew LatimerProfessor: Plant Sciences Department, Ecology Grad Group, Center for Population Biology, UC DavisVerificeret mail på ucdavis.edu
Alisha HollowayPhylos BioscienceVerificeret mail på phylosbioscience.com
Jeremy TaylorUniversity of MissouriVerificeret mail på missouri.edu
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerificeret mail på ics.forth.gr

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Mark T. Holder

Associate Professor of Ecology and Evolutionary Biology, University of Kansas

Verificeret mail på ku.edu - Startside

Evolutionary Biology


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
DendroPy: a Python library for phylogenetic computing J Sukumaran, MT Holder Bioinformatics 26 (12), 1569-1571, 2010	1760	2010
Phylogeny estimation: traditional and Bayesian approaches M Holder, PO Lewis Nature reviews genetics 4 (4), 275-284, 2003	946	2003
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ... Systematic biology 61 (1), 170-173, 2012	713	2012
SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees K Liu, TJ Warnow, MT Holder, SM Nelesen, J Yu, AP Stamatakis, ... Systematic biology 61 (1), 90, 2012	413	2012
Polytomies and Bayesian phylogenetic inference PO Lewis, MT Holder, KE Holsinger Systematic biology 54 (2), 241-253, 2005	352	2005
Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness V Edgcomb, W Orsi, J Bunge, S Jeon, R Christen, C Leslin, M Holder, ... The ISME journal 5 (8), 1344-1356, 2011	255	2011
The interface of protein structure, protein biophysics, and molecular evolution DA Liberles, SA Teichmann, I Bahar, U Bastolla, J Bloom, ... Protein Science 21 (6), 769-785, 2012	243	2012
The posterior and the prior in Bayesian phylogenetics ME Alfaro, MT Holder Annu. Rev. Ecol. Evol. Syst. 37 (1), 19-42, 2006	238	2006
Difficulties in detecting hybridization MT Holder, JA Anderson, AK Holloway Systematic Biology 50 (6), 978-982, 2001	207	2001
Detection of multiple paternity in the Kemp's ridley sea turtle with limited sampling Kichler, Holder, Owens Molecular Ecology 8 (5), 819-830, 1999	158	1999
Explaining species distribution patterns through hierarchical modeling AE Gelfand, M Holder, A Latimer, PO Lewis, AG Rebelo, JA Silander Jr, ...	154	2006
Genetic algorithms and parallel processing in maximum-likelihood phylogeny inference MJ Brauer, MT Holder, LA Dries, DJ Zwickl, PO Lewis, DM Hillis Molecular Biology and Evolution 19 (10), 1717-1726, 2002	118	2002
NeXML: rich, extensible, and verifiable representation of comparative data and metadata RA Vos, JP Balhoff, JA Caravas, MT Holder, H Lapp, WP Maddison, ... Systematic biology 61 (4), 675-689, 2012	115	2012
A Dirichlet process prior for estimating lineage-specific substitution rates TA Heath, MT Holder, JP Huelsenbeck Molecular biology and evolution 29 (3), 939-955, 2012	113	2012
The big questions for biodiversity informatics AT Peterson, S Knapp, R Guralnick, J Soberón, MT Holder Systematics and biodiversity 8 (2), 159-168, 2010	112	2010
A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics MT Holder, J Sukumaran, PO Lewis Systematic biology 57 (5), 814-821, 2008	101	2008
The phylogenetic position of Myxozoa: exploring conflicting signals in phylogenomic and ribosomal data sets NM Evans, MT Holder, MS Barbeitos, B Okamura, P Cartwright Molecular biology and evolution 27 (12), 2733-2746, 2010	100	2010
Two living species of coelacanths? MT Holder, MV Erdmann, TP Wilcox, RL Caldwell, DM Hillis Proceedings of the National Academy of Sciences 96 (22), 12616-12620, 1999	97	1999
Model parameterization, prior distributions, and the general time-reversible model in Bayesian phylogenetics DJ Zwickl, MT Holder Systematic Biology 53 (6), 877-888, 2004	92	2004
Incorporating the speciation process into species delimitation J Sukumaran, MT Holder, LL Knowles PLoS Computational Biology 17 (5), e1008924, 2021	87	2021

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