Marnix Medema

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Kai BlinSenior Researcher at the Novo Nordisk Foundation Center for BiosustainabilityVerificeret mail på biosustain.dtu.dk
Tilmann WeberProfessor / Associate Scientific Director @ DTU Biosustain, Technical University of DenmarkVerificeret mail på biosustain.dtu.dk
Eriko TakanoProfessor of Synthetic Biology, Manchester Institute of Biotechnology, University of ManchesterVerificeret mail på manchester.ac.uk
Rainer BreitlingProfessor of Systems Biology, Manchester Institute of Biotechnology, University of ManchesterVerificeret mail på manchester.ac.uk
Gilles van WezelLeiden University; NIOO-KNAWVerificeret mail på biology.leidenuniv.nl
Michael A FischbachStanford UniversityVerificeret mail på fischbachgroup.org
Justin J.J. van der HooftAssistant Professor Computational Metabolomics @ WURVerificeret mail på wur.nl
Satria A KautsarJoint Genome Institute / Berkeley LabVerificeret mail på lbl.gov
Jos M RaaijmakersKNAW, Leiden UniversityVerificeret mail på nioo.knaw.nl
Peter CimermančičScientist, VerilyVerificeret mail på ucsf.edu
Hernando SuarezWageningen UniversityVerificeret mail på wur.nl
Nadine ZiemertAssociate Professor at University of Tuebingen, GermanyVerificeret mail på uni-tuebingen.de
Sang Yup LeeKAISTVerificeret mail på kaist.ac.kr
Mohammad Alanjarywageningen university and researchVerificeret mail på wur.nl
Pieter C DorresteinUCSDVerificeret mail på ucsd.edu
Vittorio TracannaPostdoc, Cologne UniversityVerificeret mail på uni-koeln.de
Hyun Uk KimKAISTVerificeret mail på kaist.ac.kr
Victor J CarrionRamón y Cajal researcher/Assistant ProfessorVerificeret mail på biology.leidenuniv.nl
Daniel KrugHelmholtz Institute for Pharmaceutical Research SaarlandVerificeret mail på helmholtz-hzi.de
Victor de JagerRadboudUMC, dept of Human GeneticsVerificeret mail på radboudumc.nl

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Marnix Medema

Professor of Bioinformatics at Wageningen University & Leiden University

Verificeret mail på wur.nl - Startside

Computational Biology Bioinformatics Natural Products Microbiomes Synthetic Biology


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ... Nucleic acids research 47 (W1), W81-W87, 2019	2892	2019
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences MH Medema, K Blin, P Cimermancic, V de Jager, P Zakrzewski, ... Nucleic Acids Research 39 (suppl 2), W339, 2011	2205	2011
antiSMASH 6.0: improving cluster detection and comparison capabilities K Blin, S Shaw, AM Kloosterman, Z Charlop-Powers, GP Van Wezel, ... Nucleic acids research 49 (W1), W29-W35, 2021	2176	2021
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ... Nucleic acids research 43 (W1), W237-W243, 2015	2100	2015
Structure and function of the global topsoil microbiome M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ... Nature 560 (7717), 233-237, 2018	1927	2018
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ... Nucleic acids research 45 (W1), W36-W41, 2017	1296	2017
Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters P Cimermancic, MH Medema, J Claesen, K Kurita, LCW Brown, ... Cell 158 (2), 412-421, 2014	1043	2014
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation K Blin, S Shaw, HE Augustijn, ZL Reitz, F Biermann, M Alanjary, A Fetter, ... Nucleic acids research 51 (W1), W46-W50, 2023	1032	2023
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ... Nucleic acids research 41 (W1), W204-W212, 2013	988	2013
Minimum information about a biosynthetic gene cluster MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ... Nature chemical biology 11 (9), 625-631, 2015	940	2015
Towards the sustainable discovery and development of new antibiotics M Miethke, M Pieroni, T Weber, M Brönstrup, P Hammann, L Halby, ... Nature Reviews Chemistry 5 (10), 726-749, 2021	889	2021
Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome VJ Carrión, J Perez-Jaramillo, V Cordovez, V Tracanna, M De Hollander, ... Science 366 (6465), 606-612, 2019	849	2019
A computational framework to explore large-scale biosynthetic diversity JC Navarro-Muñoz, N Selem-Mojica, MW Mullowney, SA Kautsar, ... Nature chemical biology 16 (1), 60-68, 2020	773	2020
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher Nucleic Acids Research 39 (suppl 2), W362, 2011	738	2011
MIBiG 2.0: a repository for biosynthetic gene clusters of known function SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ... Nucleic acids research 48 (D1), D454-D458, 2020	649	2020
Denitrifying bacteria anaerobically oxidize methane in the absence of Archaea KF Ettwig, S Shima, KT Van De Pas‐Schoonen, J Kahnt, MH Medema, ... Environmental microbiology 10 (11), 3164-3173, 2008	533	2008
Computational approaches to natural product discovery MH Medema, MA Fischbach Nature chemical biology 11 (9), 639-648, 2015	520	2015
Detecting sequence homology at the gene cluster level with MultiGeneBlast MH Medema, E Takano, R Breitling Molecular biology and evolution 30 (5), 1218-1223, 2013	388	2013
Ecology and genomics of Actinobacteria: new concepts for natural product discovery DA van Bergeijk, BR Terlouw, MH Medema, GP van Wezel Nature Reviews Microbiology 18 (10), 546-558, 2020	372	2020
The natural products atlas: an open access knowledge base for microbial natural products discovery JA Van Santen, G Jacob, AL Singh, V Aniebok, MJ Balunas, D Bunsko, ... ACS central science 5 (11), 1824-1833, 2019	367	2019

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