Oskar Karlsson Lindsjö

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Fredrik GranbergAssociate professor, Swedish University of Agricultural SciencesVerificeret mail på slu.se
Sandor Belakprofessor emeritus, Swedish University of Agricultural Sciences, Uppsala, SwedenVerificeret mail på belak.se
Erik Bongcam-RudloffProfessor in Bioinformatics,Swedish University of Agricultural Sciences, SwedenVerificeret mail på slu.se
Hadrien GourléPostDoc, Umeå UniversityVerificeret mail på umu.se
Juliette HayerPhD Bioinformatics, IRD - French National Research Institute for Sustainable DevelopmentVerificeret mail på ird.fr
Anna SchnürerSwedish University of Agricultural SciencesVerificeret mail på slu.se
Johan Höglundprofessor in veterinary parasitology, Swedish University of Agricultural SciencesVerificeret mail på slu.se
Tomas F. BergströmSLUVerificeret mail på slu.se
Frida MartinSwedish University of Agricultural SciencesVerificeret mail på slu.se
Eva TydénVerificeret mail på slu.se
Martin NorlingAssembly Expert BILSVerificeret mail på imbim.uu.se
José Manuel Sánchez-VizcaínoAnimal Health and VISAVET. Universidad Complutense MadridVerificeret mail på ucm.es
Anne-Lie BlomströmAssociate professor in molecular virologyVerificeret mail på slu.se
Abhijeet SinghPostdoctoral researcher, Swedish University of Agricultural SciencesVerificeret mail på slu.se
Mikael LeijonAssociate professor, Swedish Veterinary AgencyVerificeret mail på sva.se
Charlotta LöfströmResearch Scientist, RISE Research Institutes of SwedenVerificeret mail på ri.se
Adnan NiaziSwedish University of Agricultural SciencesVerificeret mail på slu.se
Ingrid HanssonProfessor Veterinärmedicinsk BakteriologiVerificeret mail på slu.se
Jonas WensmanSwedish University of Agricultural SciencesVerificeret mail på slu.se
Professor Gerald MisinzoDepartment of Veterinary Microbiology, Parasitology and Biotechnology, Sokoine University ofVerificeret mail på sua.ac.tz

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Oskar Karlsson Lindsjö

PhD in Pathobiology with a specialization in microbiology, Public Health Agency of Sweden

Verificeret mail på folkhalsomyndigheten.se

Metagenomics Virology Prepardness Virome Pathobiome


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020	269	2020
Simulating Illumina metagenomic data with InSilicoSeq H Gourlé, O Karlsson-Lindsjö, J Hayer, E Bongcam-Rudloff Bioinformatics 35 (3), 521-522, 2019	196	2019
Metagenomic detection of viral pathogens in Spanish honeybees: co-infection by aphid lethal paralysis, Israel acute paralysis and Lake Sinai viruses F Granberg, M Vicente-Rubiano, C Rubio-Guerri, OE Karlsson, ... PloS one 8 (2), e57459, 2013	151	2013
Microbial community adaptability to altered temperature conditions determines the potential for process optimisation in biogas production M Westerholm, S Isaksson, OK Lindsjö, A Schnürer Applied Energy 226, 838-848, 2018	129	2018
New viruses in veterinary medicine, detected by metagenomic approaches S Belák, OE Karlsson, AL Blomström, M Berg, F Granberg Veterinary microbiology 165 (1-2), 95-101, 2013	78	2013
Detection of novel syntrophic acetate‐oxidizing bacteria from biogas processes by continuous acetate enrichment approaches M Westerholm, B Müller, A Singh, O Karlsson Lindsjö, A Schnürer Microbial biotechnology 11 (4), 680-693, 2018	72	2018
The effect of preprocessing by sequence-independent, single-primer amplification (SISPA) on metagenomic detection of viruses OE Karlsson, S Belák, F Granberg Biosecurity and bioterrorism: biodefense strategy, practice, and science 11 …, 2013	66	2013
Resistance to pyrantel embonate and efficacy of fenbendazole in Parascaris univalens on Swedish stud farms F Martin, J Höglund, TF Bergström, OK Lindsjö, E Tydén Veterinary parasitology 264, 69-73, 2018	59	2018
The intestinal eukaryotic virome in healthy and diarrhoeic neonatal piglets OE Karlsson, J Larsson, J Hayer, M Berg, M Jacobson PloS one 11 (3), e0151481, 2016	43	2016
Identification of Transmission Routes of Campylobacter and On-Farm Measures to Reduce Campylobacter in Chicken S Frosth, O Karlsson-Lindsjö, A Niazi, LL Fernström, I Hansson Pathogens 9 (5), 363, 2020	40	2020
Intrauterine vertical SARS‐CoV‐2 infection: a case confirming transplacental transmission followed by divergence of the viral genome M Zaigham, A Holmberg, ML Karlberg, OK Lindsjö, L Jokubkiene, ... Bjog 128 (8), 1388, 2021	36	2021
Ten-Week Follow-Up of Monkeypox Case-Patient, Sweden, 2022. A Pettke, F Filén, K Widgren, A Jacks, H Glans, S Andreasson, ... Emerging infectious diseases 28 (10), 2074-2077, 2022	33	2022
Transcriptional responses in Parascaris univalens after in vitro exposure to ivermectin, pyrantel citrate and thiabendazole F Martin, F Dube, O Karlsson Lindsjö, M Eydal, J Höglund, TF Bergström, ... Parasites & Vectors 13, 1-14, 2020	25	2020
Metagenomic detection methods in biopreparedness outbreak scenarios OE Karlsson, T Hansen, R Knutsson, C Löfström, F Granberg, M Berg Biosecurity and bioterrorism: biodefense strategy, practice, and science 11 …, 2013	24	2013
High-throughput sequencing in veterinary infection biology and diagnostics S Belák, OE Karlsson, M Leijon, F Granberg Rev Sci Tech 32 (3), 893-915, 2013	23	2013
MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies M Norling, OE Karlsson-Lindsjö, H Gourlé, E Bongcam-Rudloff, J Hayer PLoS One 11 (8), e0160334, 2016	16	2016
Cross-Sectional Variations in Structure and Function of Coral Reef Microbiome With Local Anthropogenic Impacts on the Kenyan Coast of the Indian Ocean S Wambua, H Gourlé, EP de Villiers, O Karlsson-Lindsjö, N Wambiji, ... Frontiers in Microbiology 12, 673128, 2021	12	2021
High Prevalence of SARS-CoV-2 Omicron Infection Despite High Seroprevalence, Sweden, 2022 R Groenheit, P Bacchus, I Galanis, K Sondén, I Bujila, T Efimova, F Garli, ... Emerging Infectious Diseases 29 (6), 1240, 2023	10	2023
Detection of an IMI-2 carbapenemase-producing Enterobacter asburiae at a Swedish feed mill S Börjesson, MSM Brouwer, E Östlund, J Eriksson, J Elving, OK Lindsjö, ... Frontiers in Microbiology 13, 2022	8	2022
Astrovirus VA1/HMO encephalitis after allogeneic hematopoietic cell transplantation: Significant role of immune competence in virus control L Król, D Turkiewicz, K Nordborg, E Englund, L Stenberg, ... Pediatric Blood & Cancer 68 (12), e29286, 2021	8	2021

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